G385819


Basic Information

Item Value
gene id G385819
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 28292081 ~ 28292281 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU438231
gttaatgtgaagtgatttattaaaacatgagtcaaaataaccacgctgcgctttggtccgcctctccgtcAATGGAAGAAATCCCTTACAATGGTGAATTTTTGACATTGACGATATATTGTGAAGTGCAAGAAGATATTTTGTGGTGTTCAAGACTATGCTCTATTTGAACATTACAAACCAAAACTGTGCAGTTGTATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU438231 True 201 lncRNA 0.37 1 28292081 28292281

Neighbor

gene id symbol gene type direction distance location
LOC118964581 NA coding upstream 27746 28261777 ~ 28264335 (+)
LOC110518653 LOC106566474 coding upstream 30505 28257967 ~ 28261576 (+)
LOC110523538 NA coding upstream 50411 28239115 ~ 28241670 (+)
ftsj1 LOC106566467 coding upstream 56581 28228013 ~ 28235500 (+)
LOC110523534 LOC106566461 coding upstream 179302 28109822 ~ 28112779 (+)
LOC118964582 NA coding downstream 5442 28297723 ~ 28303108 (+)
rnf180 LOC106566588 coding downstream 114443 28406724 ~ 28416408 (+)
rgs7bpb LOC106566593 coding downstream 125941 28418222 ~ 28423947 (+)
ghr1 ghr1 coding downstream 146797 28439078 ~ 28463949 (+)
LOC110523547 ccdc152 coding downstream 171818 28464099 ~ 28467134 (+)
G385817 NA non-coding upstream 8026 28283838 ~ 28284055 (+)
G385816 NA non-coding upstream 9512 28282361 ~ 28282569 (+)
G385812 NA non-coding upstream 14625 28277221 ~ 28277456 (+)
G385809 NA non-coding upstream 16835 28274957 ~ 28275246 (+)
G385733 NA non-coding upstream 35257 28253864 ~ 28256824 (+)
G385831 NA non-coding downstream 22871 28315152 ~ 28315429 (+)
G385832 NA non-coding downstream 23454 28315735 ~ 28315958 (+)
G385837 NA non-coding downstream 42121 28334402 ~ 28334852 (+)
G385843 NA non-coding downstream 67097 28359378 ~ 28360037 (+)
G385171 LOC106566130 other upstream 387350 27904467 ~ 27904731 (+)
G385053 NA other upstream 585003 27706714 ~ 27707078 (+)
LOC110522888 LOC106566402 other upstream 608688 27675352 ~ 27719165 (+)
G383794 LOC106566282 other upstream 1628468 26661838 ~ 26663613 (+)
LOC110522865 LOC106567246 other upstream 1831385 26437517 ~ 26502284 (+)
G385805 NA other downstream 124324 28416605 ~ 28417555 (+)
spag8 LOC106566715 other downstream 633996 28926263 ~ 28931410 (+)
tbx5a LOC106566939 other downstream 1449519 29741800 ~ 29763439 (+)
G387516 NA other downstream 1604705 29896986 ~ 29898134 (+)
G388019 NA other downstream 1994670 30286951 ~ 30287824 (+)

Expression


Co-expression Network