G385864


Basic Information

Item Value
gene id G385864
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 28388727 ~ 28388933 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU438277
atcctcagataatcgcatcgtattctttcgcagtaaatccttttttaaatctgacaacgcagttggattagcaagattctaggcttttgaaacatgtgagacacttgtattttcatgaatgtttaatatgactatttatgtagtgatcaccgtatgttgtcgaatgtaatcccgctaacgggttcggtGCGTAGAGAggttaaagaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU438277 True 207 lncRNA 0.37 1 28388727 28388933

Neighbor

gene id symbol gene type direction distance location
ank1b LOC106566514 coding upstream 41809 28269837 ~ 28346918 (+)
LOC118964582 NA coding upstream 85619 28297723 ~ 28303108 (+)
LOC118964581 NA coding upstream 124392 28261777 ~ 28264335 (+)
LOC110518653 LOC106566474 coding upstream 127151 28257967 ~ 28261576 (+)
LOC110523538 NA coding upstream 147057 28239115 ~ 28241670 (+)
rnf180 LOC106566588 coding downstream 17791 28406724 ~ 28416408 (+)
rgs7bpb LOC106566593 coding downstream 29289 28418222 ~ 28423947 (+)
ghr1 ghr1 coding downstream 50145 28439078 ~ 28463949 (+)
LOC110523547 ccdc152 coding downstream 75166 28464099 ~ 28467134 (+)
LOC110522905 LOC106563371 coding downstream 84614 28473547 ~ 28475595 (+)
G385857 NA non-coding upstream 6838 28381657 ~ 28381889 (+)
G385856 NA non-coding upstream 7747 28380757 ~ 28380980 (+)
G385848 NA non-coding upstream 20833 28366757 ~ 28367894 (+)
G385845 NA non-coding upstream 22224 28365083 ~ 28366503 (+)
G385843 NA non-coding upstream 28690 28359378 ~ 28360037 (+)
G385868 NA non-coding downstream 7604 28396537 ~ 28396746 (+)
G385884 NA non-coding downstream 35370 28424303 ~ 28424517 (+)
G385886 NA non-coding downstream 35587 28424520 ~ 28424894 (+)
G385885 NA non-coding downstream 41748 28430681 ~ 28432375 (+)
G385891 NA non-coding downstream 83136 28472069 ~ 28472287 (+)
G385171 LOC106566130 other upstream 483996 27904467 ~ 27904731 (+)
G385053 NA other upstream 681649 27706714 ~ 27707078 (+)
LOC110522888 LOC106566402 other upstream 705334 27675352 ~ 27719165 (+)
G383794 LOC106566282 other upstream 1725114 26661838 ~ 26663613 (+)
LOC110522865 LOC106567246 other upstream 1928031 26437517 ~ 26502284 (+)
G385805 NA other downstream 27672 28416605 ~ 28417555 (+)
spag8 LOC106566715 other downstream 537344 28926263 ~ 28931410 (+)
tbx5a LOC106566939 other downstream 1352867 29741800 ~ 29763439 (+)
G387516 NA other downstream 1508053 29896986 ~ 29898134 (+)
G388019 NA other downstream 1898018 30286951 ~ 30287824 (+)

Expression


Co-expression Network