G385891


Basic Information

Item Value
gene id G385891
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 28472069 ~ 28472287 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU438307
caccccttacccgttccacagcggccttggtcgcacctgtcggcgGATTTTCTAACCGATCTCCCCCATCACAGGTTAACACCGCGATCCTGGTCTTTGTGGATCGGTTCTcgaagtcctgccgtctcctccctctgcccggtctccctacggccctacagactgcggaggccttgtttacacacgtcttccggcactacagggtgcctgaggatatag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU438307 True 219 lncRNA 0.59 1 28472069 28472287

Neighbor

gene id symbol gene type direction distance location
LOC110523547 ccdc152 coding upstream 4935 28464099 ~ 28467134 (+)
ghr1 ghr1 coding upstream 8120 28439078 ~ 28463949 (+)
rgs7bpb LOC106566593 coding upstream 48122 28418222 ~ 28423947 (+)
rnf180 LOC106566588 coding upstream 55661 28406724 ~ 28416408 (+)
ank1b LOC106566514 coding upstream 125151 28269837 ~ 28346918 (+)
LOC110522905 LOC106563371 coding downstream 1260 28473547 ~ 28475595 (+)
LOC110523549 LOC106567216 coding downstream 9145 28481432 ~ 28483385 (+)
pip5k1ba LOC106566653 coding downstream 247990 28720277 ~ 28733042 (+)
LOC110523554 LOC106566671 coding downstream 265174 28737461 ~ 28780731 (+)
LOC110523556 LOC106566689 coding downstream 324161 28796448 ~ 28804711 (+)
G385885 NA non-coding upstream 39694 28430681 ~ 28432375 (+)
G385886 NA non-coding upstream 47175 28424520 ~ 28424894 (+)
G385884 NA non-coding upstream 47552 28424303 ~ 28424517 (+)
G385868 NA non-coding upstream 75323 28396537 ~ 28396746 (+)
G385864 NA non-coding upstream 83136 28388727 ~ 28388933 (+)
G385933 NA non-coding downstream 64052 28536339 ~ 28539057 (+)
G385946 NA non-coding downstream 87960 28560247 ~ 28560612 (+)
G385973 NA non-coding downstream 186285 28658572 ~ 28658860 (+)
G386018 NA non-coding downstream 195173 28667460 ~ 28667837 (+)
G385805 NA other upstream 54514 28416605 ~ 28417555 (+)
G385171 LOC106566130 other upstream 567338 27904467 ~ 27904731 (+)
G385053 NA other upstream 764991 27706714 ~ 27707078 (+)
LOC110522888 LOC106566402 other upstream 788676 27675352 ~ 27719165 (+)
G383794 LOC106566282 other upstream 1808456 26661838 ~ 26663613 (+)
spag8 LOC106566715 other downstream 453990 28926263 ~ 28931410 (+)
tbx5a LOC106566939 other downstream 1269513 29741800 ~ 29763439 (+)
G387516 NA other downstream 1424699 29896986 ~ 29898134 (+)
G388019 NA other downstream 1814664 30286951 ~ 30287824 (+)
G390184 NA other downstream 3488068 31960355 ~ 31960745 (+)

Expression


Co-expression Network