G391901


Basic Information

Item Value
gene id G391901
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 33800308 ~ 33802030 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU444849
ATGCTCTTTATTAATTCACAAGGTATAGCTGTCAAATGCAAATTCACAAAATCCAGATTGACTAAATGCAGACACAGAATTTCATGCAGTCCTTGATACCACTGCAGTGCAATGAACATCCAGAAGGGAGAGCAGGAAAACAAGTCCATGTTGTGTATTGAACTACTAGCTATCAAGACAGTTAAACAAGAACGATACAGAAAGACAGCCAAAAATATTGCTCGTCTTAACAACACAATTGTTGATGTAGCAATATGTACAGGATGTGGAGCACAAAAATACTTGCATTTGGTCACTGTGCTTTGAAATCTAAACCAGGCTGTGTTAACGTAATGACAGCCAGACACCCGAGTCAGGACCAACATAAGAACAGTGCAAGGCAATGGTGTGGATGCATCTCTAAAATAATCATCCAAATGAAAAACAGCCTCTGAGTTAATTTATTTCCTCACAATTGACATTACTTTGAATATAAGGATTGAGTGGAGACCAGTAAAATGCACTGACAGTACAGGCAAGAGCCCCTTCAATGTCGATATACTCCTCAACCCACCGTTTACACCTGTGTATTCTAGAGGGATCAGTTGAGCACCAACAATGTATTATACAGAATCAGAATACACCTAGTAAAATGTAGTTCAGAACAAGGCAGCGCTCGCTGTGTCCGAGCATAGTGTCGATACCAAACTAGAGAAACTGTTAGTTGAGTGACTTGTAGAGAAGTGGTTGAGAAACTGCTGGCAAAACTAAACTCCTTGTTGAAATAGATTGTATGTCTAATTAAACTCGACACGCTATGGAAATTCCCCTGCGAGGGCCAGTAAACTCGCCCATTTgtcaaaaaaaagtatttaacccCTTCAATGCATTCTGAGCTTTGAATATTGTTTTATGATaaatacaacaaaacaaaaatgaaccTCAAGCTCCCCCCTGTATGAAGCTTTGTTTCAACTCCTCTTCATACGGACTGTCTAATTACAAGTATTGGAAATATGACAGTTACCACTTATCCATTAGCCTGgTCTAATGCATTTCAATGAGACTTACAGTTGTTAAAAGTGAAAATGTCAGACACCAAAACAGTGAAGCAGCCTTTTAGTCTGCAGAAAAAACACCTTACATGGTGAATAGGAGAACTTACTTGAGGCCAATCCAATCTGGCAAAAACAAAGCGTGTATCAATACTAAGACACCTACACATAGAGAGTAAAGCATAAGATACCATGTGACCATTTTGCTCATGAATGACAAAGGGTGATTCTCATATTCCAATTGATGAAACACAAACATCCAGCTCACAGTAAGAGTAAGGCAGAGATAGTAGAGCATGTAAGGGCACAAGCGAGACCAAGCAGAGGGTTGTGGTGGTTGAGTTGGGGTTTGCTCTGGTTCTGGGTGAAGGGTAGGTGTGTGGTTGTGGTGATGTTCTGGACTTGCGTTCCTTTTCTTCTTCTAGTTGAGGCTCAGTCCTCAAGGCATTCGGGTCCAGCTAAAAACAGTCAAATGACAAGTACAATTAAATGAGAATACAATAAGCACGCACGGGGGCTTAGCAGTCGCTCCTCCACAGTTTGATGGTTTTGTCGTTTTCTAGCGCCGCAGATGCAATGATGTTCTCTGTGGGGTGGCAGGCAGTAGAAATCAC

Function

NR:

description
PREDICTED: WD repeat-containing protein 5-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU444849 True 1648 lncRNA 0.41 2 33800308 33802030

Neighbor

gene id symbol gene type direction distance location
LOC100136128 LOC106565394 coding upstream 594 33640488 ~ 33799714 (+)
LOC110523645 LOC106565424 coding upstream 307910 33490123 ~ 33492398 (+)
LOC110523644 LOC106565434 coding upstream 353802 33417418 ~ 33446506 (+)
tsc1b LOC106565454 coding upstream 541233 33226370 ~ 33259075 (+)
LOC110523632 LOC106565566 coding upstream 836339 32909966 ~ 32963969 (+)
LOC110523646 LOC106565369 coding downstream 28676 33830706 ~ 33844121 (+)
LOC110523649 LOC106565324 coding downstream 44743 33846773 ~ 34088984 (+)
trnaa-ugc-11 NA coding downstream 230735 34032765 ~ 34032840 (+)
si:ch211-127i16.2 LOC106565287 coding downstream 305150 34107180 ~ 34147326 (+)
adra1ab LOC106565247 coding downstream 634756 34436786 ~ 34448792 (+)
G391969 NA non-coding upstream 93334 33651459 ~ 33706974 (+)
G391985 NA non-coding upstream 109797 33689980 ~ 33690511 (+)
G391902 NA non-coding upstream 156762 33643221 ~ 33643546 (+)
G391942 NA non-coding upstream 196616 33601561 ~ 33603692 (+)
G392135 NA non-coding downstream 131403 33933433 ~ 33934607 (+)
G392165 NA non-coding downstream 167023 33969053 ~ 33969268 (+)
G392195 NA non-coding downstream 226015 34028045 ~ 34071385 (+)
G392220 NA non-coding downstream 254404 34056434 ~ 34060864 (+)
G391805 NA other upstream 438967 33360957 ~ 33361341 (+)
G391513 LOC100136561 other upstream 637328 33158826 ~ 33162980 (+)
G390393 NA other upstream 1579775 32220181 ~ 32220533 (+)
G390184 NA other upstream 1839563 31960355 ~ 31960745 (+)
G388019 NA other upstream 3512484 30286951 ~ 30287824 (+)
G392776 NA other downstream 345444 34147474 ~ 34150795 (+)
G394882 NA other downstream 2103082 35905112 ~ 35905781 (+)
G394910 NA other downstream 2164907 35966937 ~ 36004829 (+)
you2 you2 other downstream 2231230 36033260 ~ 36034806 (+)
G395005 LOC106564805 other downstream 2400871 36202901 ~ 36206616 (+)

Expression


Co-expression Network