G392220


Basic Information

Item Value
gene id G392220
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 34056434 ~ 34060864 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU445199
tcgtaaatctaaaacgtgtaaagaacatggcccacctagcctgacgcggattcagtctcctcgctgctcgaatatactccagattacggtgatcagtccagatgagaaaagggtgtttagccccctctagccagtgtctccacaccttcagggcctttaccatagctagtaactcccggtcccccacatcatagttccgctctgccggacccagcttcttcgaaaagaaagcgcagggacggagcttcggtggcgtgcccgagcgctgagacagcacggc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU445199 True 280 lncRNA 0.55 2 34056434 34060864

Neighbor

gene id symbol gene type direction distance location
trnaa-ugc-11 NA coding upstream 23594 34032765 ~ 34032840 (+)
LOC110523646 LOC106565369 coding upstream 212313 33830706 ~ 33844121 (+)
LOC100136128 LOC106565394 coding upstream 256720 33640488 ~ 33799714 (+)
LOC110523645 LOC106565424 coding upstream 564036 33490123 ~ 33492398 (+)
LOC110523644 LOC106565434 coding upstream 609928 33417418 ~ 33446506 (+)
si:ch211-127i16.2 LOC106565287 coding downstream 46316 34107180 ~ 34147326 (+)
adra1ab LOC106565247 coding downstream 375922 34436786 ~ 34448792 (+)
LOC110523660 LOC106565209 coding downstream 1025962 35086826 ~ 35206863 (+)
si:dkey-242g16.2 LOC106565196 coding downstream 1293234 35354098 ~ 35357244 (+)
stoml2 stml2 coding downstream 1407076 35467940 ~ 35480670 (+)
G392165 NA non-coding upstream 87166 33969053 ~ 33969268 (+)
G392135 NA non-coding upstream 121827 33933433 ~ 33934607 (+)
G391901 NA non-coding upstream 254404 33800308 ~ 33802030 (+)
G391985 NA non-coding upstream 365923 33689980 ~ 33690511 (+)
G392226 NA non-coding downstream 17990 34078854 ~ 34079110 (+)
LOC110523649 LOC106565324 non-coding downstream 27429 33846773 ~ 34088984 (+)
G392063 NA non-coding downstream 28231 34089095 ~ 34089794 (+)
G392756 NA non-coding downstream 30988 34091852 ~ 34092186 (+)
G392776 NA non-coding downstream 86842 34147474 ~ 34150795 (+)
G391805 NA other upstream 695093 33360957 ~ 33361341 (+)
G391513 LOC100136561 other upstream 893454 33158826 ~ 33162980 (+)
G390393 NA other upstream 1835901 32220181 ~ 32220533 (+)
G390184 NA other upstream 2095689 31960355 ~ 31960745 (+)
G388019 NA other upstream 3768610 30286951 ~ 30287824 (+)
G394882 NA other downstream 1844248 35905112 ~ 35905781 (+)
G394910 NA other downstream 1906073 35966937 ~ 36004829 (+)
you2 you2 other downstream 1972396 36033260 ~ 36034806 (+)
G395005 LOC106564805 other downstream 2142037 36202901 ~ 36206616 (+)

Expression


Co-expression Network