G392226


Basic Information

Item Value
gene id G392226
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 34078854 ~ 34079110 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU445205
CTATTTATAGATTTTTaaaatttttacttttactttactaaaTAAAttttagggctcccgagtggggcGGTGGTCtcagacactgcatctcagtgcaagaggcgtcactgcagtccctggttcgaatccagactgcatcacatccggctgtgattgggagtcccatagggcggcgcacaattggcacagcgtcgtccgggtttggccggagtagggcgtcattataaataagaatttgttcttaactgacttgccta

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU445205 True 257 lncRNA 0.47 1 34078854 34079110

Neighbor

gene id symbol gene type direction distance location
trnaa-ugc-11 NA coding upstream 46014 34032765 ~ 34032840 (+)
LOC110523646 LOC106565369 coding upstream 234733 33830706 ~ 33844121 (+)
LOC100136128 LOC106565394 coding upstream 279140 33640488 ~ 33799714 (+)
LOC110523645 LOC106565424 coding upstream 586456 33490123 ~ 33492398 (+)
LOC110523644 LOC106565434 coding upstream 632348 33417418 ~ 33446506 (+)
si:ch211-127i16.2 LOC106565287 coding downstream 28070 34107180 ~ 34147326 (+)
adra1ab LOC106565247 coding downstream 357676 34436786 ~ 34448792 (+)
LOC110523660 LOC106565209 coding downstream 1007716 35086826 ~ 35206863 (+)
si:dkey-242g16.2 LOC106565196 coding downstream 1274988 35354098 ~ 35357244 (+)
stoml2 stml2 coding downstream 1388830 35467940 ~ 35480670 (+)
G392195 NA non-coding upstream 7469 34028045 ~ 34071385 (+)
G392220 NA non-coding upstream 17990 34056434 ~ 34060864 (+)
G392165 NA non-coding upstream 109586 33969053 ~ 33969268 (+)
G392135 NA non-coding upstream 144247 33933433 ~ 33934607 (+)
LOC110523649 LOC106565324 non-coding downstream 9183 33846773 ~ 34088984 (+)
G392063 NA non-coding downstream 9985 34089095 ~ 34089794 (+)
G392756 NA non-coding downstream 12742 34091852 ~ 34092186 (+)
G392776 NA non-coding downstream 68596 34147474 ~ 34150795 (+)
G392804 NA non-coding downstream 103630 34182740 ~ 34183700 (+)
G391805 NA other upstream 717513 33360957 ~ 33361341 (+)
G391513 LOC100136561 other upstream 915874 33158826 ~ 33162980 (+)
G390393 NA other upstream 1858321 32220181 ~ 32220533 (+)
G390184 NA other upstream 2118109 31960355 ~ 31960745 (+)
G388019 NA other upstream 3791030 30286951 ~ 30287824 (+)
G394882 NA other downstream 1826002 35905112 ~ 35905781 (+)
G394910 NA other downstream 1887827 35966937 ~ 36004829 (+)
you2 you2 other downstream 1954150 36033260 ~ 36034806 (+)
G395005 LOC106564805 other downstream 2123791 36202901 ~ 36206616 (+)

Expression


Co-expression Network