G392756


Basic Information

Item Value
gene id G392756
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 34091852 ~ 34092186 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU445776
CTTGTTTTccgtggccgacatgagtaagataTTTAAgcttgttaaccctcgcaaggatgTTGGCCTAGACAGCATCCCAAGCTGTGTCCTCAGCGCATGTGCAGACCAGTTGGCTGGAgtatttacggacatattcaatctttccctatcccagtctgttgtccccacttgcatcaagatgtccaccattgttcctgtacccaagaaaatTAAGGTAACTGAAATAAATTACTATAGtgagtagcactcacttctgtcatcatgaagtgctgtgAAGGCTAGTTAAGGATTATACCACCTCCACCTTACACACCTCCATGGATGACGCAATTGAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU445776 True 335 lncRNA 0.45 1 34091852 34092186

Neighbor

gene id symbol gene type direction distance location
LOC110523649 LOC106565324 coding upstream 2868 33846773 ~ 34088984 (+)
trnaa-ugc-11 NA coding upstream 59012 34032765 ~ 34032840 (+)
LOC110523646 LOC106565369 coding upstream 247731 33830706 ~ 33844121 (+)
LOC100136128 LOC106565394 coding upstream 292138 33640488 ~ 33799714 (+)
LOC110523645 LOC106565424 coding upstream 599454 33490123 ~ 33492398 (+)
si:ch211-127i16.2 LOC106565287 coding downstream 14994 34107180 ~ 34147326 (+)
adra1ab LOC106565247 coding downstream 344600 34436786 ~ 34448792 (+)
LOC110523660 LOC106565209 coding downstream 994640 35086826 ~ 35206863 (+)
si:dkey-242g16.2 LOC106565196 coding downstream 1261912 35354098 ~ 35357244 (+)
stoml2 stml2 coding downstream 1375754 35467940 ~ 35480670 (+)
G392063 NA non-coding upstream 2058 34089095 ~ 34089794 (+)
G392226 NA non-coding upstream 12742 34078854 ~ 34079110 (+)
G392195 NA non-coding upstream 20467 34028045 ~ 34071385 (+)
G392220 NA non-coding upstream 30988 34056434 ~ 34060864 (+)
G392776 NA non-coding downstream 55520 34147474 ~ 34150795 (+)
G392804 NA non-coding downstream 90554 34182740 ~ 34183700 (+)
G392805 NA non-coding downstream 91581 34183767 ~ 34183976 (+)
G392806 NA non-coding downstream 93133 34185319 ~ 34185533 (+)
G392900 NA non-coding downstream 129970 34222156 ~ 34222491 (+)
G391805 NA other upstream 730511 33360957 ~ 33361341 (+)
G391513 LOC100136561 other upstream 928872 33158826 ~ 33162980 (+)
G390393 NA other upstream 1871319 32220181 ~ 32220533 (+)
G390184 NA other upstream 2131107 31960355 ~ 31960745 (+)
G388019 NA other upstream 3804028 30286951 ~ 30287824 (+)
G394882 NA other downstream 1812926 35905112 ~ 35905781 (+)
G394910 NA other downstream 1874751 35966937 ~ 36004829 (+)
you2 you2 other downstream 1941074 36033260 ~ 36034806 (+)
G395005 LOC106564805 other downstream 2110715 36202901 ~ 36206616 (+)

Expression


Co-expression Network