G392804


Basic Information

Item Value
gene id G392804
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 34182740 ~ 34183700 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU445841
cagtgcaacaaaaacaacacagagttacacgtggggcaaacaaacgtacagttaataacacaatagaaaaatatgtatacagtgtgtgcaaatgtaaggaggtaaggcaatacataggtcAATAGTGGCAATAGTGGTAATTAcgatttagcaatttacactggagagatatgtgcagatgaggatgtgcaagtagaaatactggtgtgcaaaagagcaaaaaaactaaaacaaatatggggatgaggtaggtagttgattgtatgggctatttacagatgggctgtgtacagctgcagcgatcggtaagctgctctgacagctgacgcttaaagttagtgagggagatataagtttccaacttcagtgatttttgcaattcgttccagtcataggcagcagagaaatggaaggaaaggcagccaaaggatgtgttggctttggggatgaccagtgcaatatacctgctggagcgcgtgctacgggggggtgttgctatggtgaccagtgagcagagataaggcagagctttacctagcaaagacttatagatgacctggaaccagtgggtttggcgacgaatatgtagcgaggaccagccaaagagagcatacaggtcacagtggaggttagtatatggggctttggtgacaaaatggatggcactgtgatagactgcatccaatttgctgagtacagtgttggaggctattttgtaaatgacatcgctgaagtcaaggatcggttggatagtcagttttacgaggatatgtttggcagcatgagtgaaggaggatttgttgcgaaataggaagctgattctagatttaactttggattggagatgcttaatgtgagactggaaggagagtttacagtctatccagacaccgagttgtccacatattctaagtcagaaccgtccagagtagtgatgctagtcaggcgggcaggtgcgggc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU445841 True 961 lncRNA 0.44 1 34182740 34183700

Neighbor

gene id symbol gene type direction distance location
si:ch211-127i16.2 LOC106565287 coding upstream 35414 34107180 ~ 34147326 (+)
LOC110523649 LOC106565324 coding upstream 93756 33846773 ~ 34088984 (+)
trnaa-ugc-11 NA coding upstream 149900 34032765 ~ 34032840 (+)
LOC110523646 LOC106565369 coding upstream 338619 33830706 ~ 33844121 (+)
LOC100136128 LOC106565394 coding upstream 383026 33640488 ~ 33799714 (+)
adra1ab LOC106565247 coding downstream 253086 34436786 ~ 34448792 (+)
LOC110523660 LOC106565209 coding downstream 903126 35086826 ~ 35206863 (+)
si:dkey-242g16.2 LOC106565196 coding downstream 1170398 35354098 ~ 35357244 (+)
stoml2 stml2 coding downstream 1284240 35467940 ~ 35480670 (+)
LOC118964586 LOC106565090 coding downstream 1298528 35482228 ~ 35542795 (+)
G392776 NA non-coding upstream 31945 34147474 ~ 34150795 (+)
G392756 NA non-coding upstream 90554 34091852 ~ 34092186 (+)
G392063 NA non-coding upstream 92946 34089095 ~ 34089794 (+)
G392226 NA non-coding upstream 103630 34078854 ~ 34079110 (+)
G392805 NA non-coding downstream 67 34183767 ~ 34183976 (+)
G392806 NA non-coding downstream 1619 34185319 ~ 34185533 (+)
G392900 NA non-coding downstream 38456 34222156 ~ 34222491 (+)
G392911 NA non-coding downstream 51474 34235174 ~ 34235518 (+)
G392920 NA non-coding downstream 59430 34243130 ~ 34243489 (+)
G391805 NA other upstream 821399 33360957 ~ 33361341 (+)
G391513 LOC100136561 other upstream 1019760 33158826 ~ 33162980 (+)
G390393 NA other upstream 1962207 32220181 ~ 32220533 (+)
G390184 NA other upstream 2221995 31960355 ~ 31960745 (+)
G394882 NA other downstream 1721412 35905112 ~ 35905781 (+)
G394910 NA other downstream 1783237 35966937 ~ 36004829 (+)
you2 you2 other downstream 1849560 36033260 ~ 36034806 (+)
G395005 LOC106564805 other downstream 2019201 36202901 ~ 36206616 (+)
G395034 NA other downstream 2096600 36280300 ~ 36301290 (+)

Expression


Co-expression Network