G392900


Basic Information

Item Value
gene id G392900
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 34222156 ~ 34222491 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU445939
CATAGGacagaccaaatcaaatcaaatcaaatgaaattttatttgtcacatacacatggttagcgagtgtagcgaaatgcttgtgcttctagttccgacaatgcagtaataaccaacaagtaatctaactaacaattccaaaactactgtcttgtacacagtgtaaggggataaagaatatgtacataaggatatatgaatgagtgatggtacagagcagcataggcaagtatatacatatgagatgagtatgtaaacaaagtggcatagttaaagtggctagtgatacatgtattacataaggatacagtcgatggtatagagtacagtatatac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU445939 True 336 lncRNA 0.35 1 34222156 34222491

Neighbor

gene id symbol gene type direction distance location
si:ch211-127i16.2 LOC106565287 coding upstream 74830 34107180 ~ 34147326 (+)
LOC110523649 LOC106565324 coding upstream 133172 33846773 ~ 34088984 (+)
trnaa-ugc-11 NA coding upstream 189316 34032765 ~ 34032840 (+)
LOC110523646 LOC106565369 coding upstream 378035 33830706 ~ 33844121 (+)
LOC100136128 LOC106565394 coding upstream 422442 33640488 ~ 33799714 (+)
adra1ab LOC106565247 coding downstream 214295 34436786 ~ 34448792 (+)
LOC110523660 LOC106565209 coding downstream 864335 35086826 ~ 35206863 (+)
si:dkey-242g16.2 LOC106565196 coding downstream 1131607 35354098 ~ 35357244 (+)
stoml2 stml2 coding downstream 1245449 35467940 ~ 35480670 (+)
LOC118964586 LOC106565090 coding downstream 1259737 35482228 ~ 35542795 (+)
G392806 NA non-coding upstream 36623 34185319 ~ 34185533 (+)
G392805 NA non-coding upstream 38180 34183767 ~ 34183976 (+)
G392804 NA non-coding upstream 38456 34182740 ~ 34183700 (+)
G392776 NA non-coding upstream 71361 34147474 ~ 34150795 (+)
G392756 NA non-coding upstream 129970 34091852 ~ 34092186 (+)
G392911 NA non-coding downstream 12683 34235174 ~ 34235518 (+)
G392920 NA non-coding downstream 20639 34243130 ~ 34243489 (+)
G392936 NA non-coding downstream 34214 34256705 ~ 34348700 (+)
G393003 NA non-coding downstream 132399 34354890 ~ 34355108 (+)
G393009 NA non-coding downstream 139193 34361684 ~ 34361891 (+)
G391805 NA other upstream 860815 33360957 ~ 33361341 (+)
G391513 LOC100136561 other upstream 1059176 33158826 ~ 33162980 (+)
G390393 NA other upstream 2001623 32220181 ~ 32220533 (+)
G390184 NA other upstream 2261411 31960355 ~ 31960745 (+)
G394882 NA other downstream 1682621 35905112 ~ 35905781 (+)
G394910 NA other downstream 1744446 35966937 ~ 36004829 (+)
you2 you2 other downstream 1810769 36033260 ~ 36034806 (+)
G395005 LOC106564805 other downstream 1980410 36202901 ~ 36206616 (+)
G395034 NA other downstream 2057809 36280300 ~ 36301290 (+)

Expression


Co-expression Network