G393208



Basic Information


Item Value
gene id G393208
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 34550941 ~ 34612776 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU446259
ctgtcaggttggatggggagcgtcgctgcacagctattttcaggtctctccagacatgttagatcgggttcaagtccgggctctggctggacccctcaaggacattcagagacttgtcccgaagccaatcctacgttgtcttggctgtgtgcttagggttgttgtcctgttggaaggtgaaccttcgccccagtctgaggtcctgagcgctctggagcaggttttcatcgagga

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU446259 True 234 lncRNA 0.55 2 34550941 34612776

Neighbor


gene id symbol gene type direction distance location
adra1ab LOC106565247 coding upstream 102149 34436786 ~ 34448792 (+)
si:ch211-127i16.2 LOC106565287 coding upstream 403615 34107180 ~ 34147326 (+)
LOC110523649 LOC106565324 coding upstream 461957 33846773 ~ 34088984 (+)
trnaa-ugc-11 NA coding upstream 518101 34032765 ~ 34032840 (+)
LOC110523646 LOC106565369 coding upstream 706820 33830706 ~ 33844121 (+)
LOC110523660 LOC106565209 coding downstream 474050 35086826 ~ 35206863 (+)
si:dkey-242g16.2 LOC106565196 coding downstream 741322 35354098 ~ 35357244 (+)
stoml2 stml2 coding downstream 855164 35467940 ~ 35480670 (+)
LOC118964586 LOC106565090 coding downstream 869452 35482228 ~ 35542795 (+)
unc13bb LOC106565090 coding downstream 933769 35546545 ~ 35595618 (+)
G393185 NA non-coding upstream 33484 34515115 ~ 34517457 (+)
G393117 LOC106565272 non-coding upstream 129152 34413404 ~ 34421789 (+)
G393107 LOC106565253 non-coding upstream 152583 34397355 ~ 34398358 (+)
G393094 NA non-coding upstream 172555 34376995 ~ 34378386 (+)
G393092 NA non-coding upstream 175373 34375258 ~ 34375568 (+)
G393367 NA non-coding downstream 169616 34782392 ~ 34785490 (+)
G393726 NA non-coding downstream 244000 34856776 ~ 34857092 (+)
G393859 NA non-coding downstream 341894 34954670 ~ 34955152 (+)
G394057 NA non-coding downstream 467727 35080503 ~ 35080815 (+)
G394083 NA non-coding downstream 490925 35103701 ~ 35103917 (+)
G392776 NA other upstream 402240 34147474 ~ 34150795 (+)
G391805 NA other upstream 1189600 33360957 ~ 33361341 (+)
G391513 LOC100136561 other upstream 1387961 33158826 ~ 33162980 (+)
G390393 NA other upstream 2330408 32220181 ~ 32220533 (+)
G390184 NA other upstream 2590196 31960355 ~ 31960745 (+)
G394882 NA other downstream 1292336 35905112 ~ 35905781 (+)
G394910 NA other downstream 1354161 35966937 ~ 36004829 (+)
you2 you2 other downstream 1420484 36033260 ~ 36034806 (+)
G395005 LOC106564805 other downstream 1590125 36202901 ~ 36206616 (+)
G395034 NA other downstream 1667524 36280300 ~ 36301290 (+)

Expression



Co-expression Network