G393248



Basic Information


Item Value
gene id G393248
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 34611962 ~ 34679537 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU446301
atgatatgcctacaaatacgtcacaatgctgctaagaccttgggcgaacgacagaaagtgtaggctcattcgttgcgcaatcacagccatataaggagagaatggaaaacagagcttcagaaattctgctaattcctgggtgatgcatcatcttggtttcgcctgtagaatgagttctggggcacttacagacaaaatctttgcagattctgaaacttcagagtgttttctttccaaaactgtatatatagaatatgcatagtcgagcatcttttcgtgacaaaatatcgc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU446301 True 291 lncRNA 0.41 2 34611962 34679537

Neighbor


gene id symbol gene type direction distance location
adra1ab LOC106565247 coding upstream 163170 34436786 ~ 34448792 (+)
si:ch211-127i16.2 LOC106565287 coding upstream 464636 34107180 ~ 34147326 (+)
LOC110523649 LOC106565324 coding upstream 522978 33846773 ~ 34088984 (+)
trnaa-ugc-11 NA coding upstream 579122 34032765 ~ 34032840 (+)
LOC110523646 LOC106565369 coding upstream 767841 33830706 ~ 33844121 (+)
LOC110523660 LOC106565209 coding downstream 407289 35086826 ~ 35206863 (+)
si:dkey-242g16.2 LOC106565196 coding downstream 674561 35354098 ~ 35357244 (+)
stoml2 stml2 coding downstream 788403 35467940 ~ 35480670 (+)
LOC118964586 LOC106565090 coding downstream 802691 35482228 ~ 35542795 (+)
unc13bb LOC106565090 coding downstream 867008 35546545 ~ 35595618 (+)
G393185 NA non-coding upstream 94505 34515115 ~ 34517457 (+)
G393117 LOC106565272 non-coding upstream 190173 34413404 ~ 34421789 (+)
G393107 LOC106565253 non-coding upstream 213604 34397355 ~ 34398358 (+)
G393094 NA non-coding upstream 233576 34376995 ~ 34378386 (+)
G393092 NA non-coding upstream 236394 34375258 ~ 34375568 (+)
G393367 NA non-coding downstream 102855 34782392 ~ 34785490 (+)
G393726 NA non-coding downstream 177239 34856776 ~ 34857092 (+)
G393859 NA non-coding downstream 275133 34954670 ~ 34955152 (+)
G394057 NA non-coding downstream 400966 35080503 ~ 35080815 (+)
G394083 NA non-coding downstream 424164 35103701 ~ 35103917 (+)
G392776 NA other upstream 463261 34147474 ~ 34150795 (+)
G391805 NA other upstream 1250621 33360957 ~ 33361341 (+)
G391513 LOC100136561 other upstream 1448982 33158826 ~ 33162980 (+)
G390393 NA other upstream 2391429 32220181 ~ 32220533 (+)
G390184 NA other upstream 2651217 31960355 ~ 31960745 (+)
G394882 NA other downstream 1225575 35905112 ~ 35905781 (+)
G394910 NA other downstream 1287400 35966937 ~ 36004829 (+)
you2 you2 other downstream 1353723 36033260 ~ 36034806 (+)
G395005 LOC106564805 other downstream 1523364 36202901 ~ 36206616 (+)
G395034 NA other downstream 1600763 36280300 ~ 36301290 (+)

Expression



Co-expression Network