G393859


Basic Information

Item Value
gene id G393859
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 34954670 ~ 34955152 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU446927
gtactgacgcttagcttgtttgatagccttgcggagggaatagctgcactgtttgtattcggtcatgttaccagacaccttgccctgattaaaagcagtggttcgcgctttcagtttcacacaaatgctgccatcaatccacggtttctggttagggaatgttttaatcgttgctatgggaacgacatcttcaacgcacgttctaatgaacttgcacaccgaatcagcgtattcgtcaatgttgttatctgacgcaatacgaaacatctcccagtccacgtgatggaagcagtcttggagtgtggagtcagcttggtcggaccagcgttggacagacctcagcgtgggagcctcttgttttagtttctgtctgtaggcagggatcaacaaaatggagtcgtggtcagcttttccgaagggggggcggggcagggccttatatgcgtcgcggaagttagagtaacaatgatccaaggtctttcc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU446927 True 483 lncRNA 0.49 1 34954670 34955152

Neighbor

gene id symbol gene type direction distance location
adra1ab LOC106565247 coding upstream 505878 34436786 ~ 34448792 (+)
si:ch211-127i16.2 LOC106565287 coding upstream 807344 34107180 ~ 34147326 (+)
LOC110523649 LOC106565324 coding upstream 865686 33846773 ~ 34088984 (+)
trnaa-ugc-11 NA coding upstream 921830 34032765 ~ 34032840 (+)
LOC110523646 LOC106565369 coding upstream 1110549 33830706 ~ 33844121 (+)
LOC110523660 LOC106565209 coding downstream 131674 35086826 ~ 35206863 (+)
si:dkey-242g16.2 LOC106565196 coding downstream 398946 35354098 ~ 35357244 (+)
stoml2 stml2 coding downstream 512788 35467940 ~ 35480670 (+)
LOC118964586 LOC106565090 coding downstream 527076 35482228 ~ 35542795 (+)
unc13bb LOC106565090 coding downstream 591393 35546545 ~ 35595618 (+)
G393726 NA non-coding upstream 97578 34856776 ~ 34857092 (+)
G393367 NA non-coding upstream 169180 34782392 ~ 34785490 (+)
G393248 NA non-coding upstream 275133 34611962 ~ 34679537 (+)
G393208 NA non-coding upstream 341894 34550941 ~ 34612776 (+)
G393185 NA non-coding upstream 437213 34515115 ~ 34517457 (+)
G394057 NA non-coding downstream 125351 35080503 ~ 35080815 (+)
G394083 NA non-coding downstream 148549 35103701 ~ 35103917 (+)
G394131 NA non-coding downstream 213905 35169057 ~ 35169286 (+)
G394137 NA non-coding downstream 224352 35179504 ~ 35179725 (+)
G394142 NA non-coding downstream 235035 35190187 ~ 35190799 (+)
G392776 NA other upstream 805969 34147474 ~ 34150795 (+)
G391805 NA other upstream 1593329 33360957 ~ 33361341 (+)
G391513 LOC100136561 other upstream 1791690 33158826 ~ 33162980 (+)
G390393 NA other upstream 2734137 32220181 ~ 32220533 (+)
G390184 NA other upstream 2993925 31960355 ~ 31960745 (+)
G394882 NA other downstream 949960 35905112 ~ 35905781 (+)
G394910 NA other downstream 1011785 35966937 ~ 36004829 (+)
you2 you2 other downstream 1078108 36033260 ~ 36034806 (+)
G395005 LOC106564805 other downstream 1247749 36202901 ~ 36206616 (+)
G395034 NA other downstream 1325148 36280300 ~ 36301290 (+)

Expression


Co-expression Network