G394373



Basic Information


Item Value
gene id G394373
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 35304311 ~ 35304545 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU447473
CTTTATGACTTCAGTGTTTTAATCTGTATGTGCTACAAAGCAAATATTGCTTGCTCTGTAATATGAGTAGCATTTTGATTTCAATAACTTTGTTTTACCTTAATTCGTGAATAATGAAGAATATAAACATGTTCCAGAGTGGATTCTCTGCTACTTTTAGAGTTATGAACCAATTTGTAAGCATTACCAACAGAGTGAatgtgaaaatggattcaaaatggtACCCTcgtaaaaa

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU447473 True 235 lncRNA 0.31 1 35304311 35304545

Neighbor


gene id symbol gene type direction distance location
LOC110523660 LOC106565209 coding upstream 105320 35086826 ~ 35206863 (+)
adra1ab LOC106565247 coding upstream 855519 34436786 ~ 34448792 (+)
si:ch211-127i16.2 LOC106565287 coding upstream 1156985 34107180 ~ 34147326 (+)
LOC110523649 LOC106565324 coding upstream 1215327 33846773 ~ 34088984 (+)
si:dkey-242g16.2 LOC106565196 coding downstream 49553 35354098 ~ 35357244 (+)
stoml2 stml2 coding downstream 163395 35467940 ~ 35480670 (+)
LOC118964586 LOC106565090 coding downstream 177683 35482228 ~ 35542795 (+)
unc13bb LOC106565090 coding downstream 242000 35546545 ~ 35595618 (+)
atp8b5b LOC106565083 coding downstream 298056 35602601 ~ 35620548 (+)
G394361 NA non-coding upstream 4669 35299373 ~ 35299642 (+)
G394321 NA non-coding upstream 34341 35269644 ~ 35269970 (+)
G394320 NA non-coding upstream 34671 35269043 ~ 35269640 (+)
G394312 NA non-coding upstream 40954 35263087 ~ 35263357 (+)
G394297 NA non-coding upstream 49191 35254791 ~ 35255120 (+)
G394485 NA non-coding downstream 138021 35442566 ~ 35443828 (+)
G394495 NA non-coding downstream 159274 35463819 ~ 35464867 (+)
G394497 NA non-coding downstream 161558 35466103 ~ 35466675 (+)
G394473 NA non-coding downstream 176363 35480908 ~ 35481712 (+)
G394475 NA non-coding downstream 255980 35560525 ~ 35596524 (+)
G392776 NA other upstream 1155610 34147474 ~ 34150795 (+)
G391805 NA other upstream 1942970 33360957 ~ 33361341 (+)
G391513 LOC100136561 other upstream 2141331 33158826 ~ 33162980 (+)
G390393 NA other upstream 3083778 32220181 ~ 32220533 (+)
G390184 NA other upstream 3343566 31960355 ~ 31960745 (+)
G394882 NA other downstream 600567 35905112 ~ 35905781 (+)
G394910 NA other downstream 662392 35966937 ~ 36004829 (+)
you2 you2 other downstream 728715 36033260 ~ 36034806 (+)
G395005 LOC106564805 other downstream 898356 36202901 ~ 36206616 (+)
G395034 NA other downstream 975755 36280300 ~ 36301290 (+)

Expression



Co-expression Network