G394731


Basic Information

Item Value
gene id G394731
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 35632439 ~ 35632653 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU447867
GTATAAACGAGAGGGAATCCTTAGTATATGCAATGTGTCTGTGTCCGACGTAAAACACATTTTTGACTTCCACACAAAATTACTTCTTTACTTATTTTAGGTTTAAGGAAAAGTGTAGGTCGGATTATTTATCGTAGAGCTATGAGAGTTATGTATTTAGATCCGCCTTCTTGGGACAAATTCAAAGATTGCTTTGAAGTAACATTACGGTGAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU447867 True 215 lncRNA 0.35 1 35632439 35632653

Neighbor

gene id symbol gene type direction distance location
atp8b5b LOC106565083 coding upstream 11891 35602601 ~ 35620548 (+)
unc13bb LOC106565090 coding upstream 36821 35546545 ~ 35595618 (+)
LOC118964586 LOC106565090 coding upstream 89644 35482228 ~ 35542795 (+)
stoml2 stml2 coding upstream 151769 35467940 ~ 35480670 (+)
si:dkey-242g16.2 LOC106565196 coding upstream 275195 35354098 ~ 35357244 (+)
LOC110523670 LOC106565078 coding downstream 7075 35639728 ~ 35651003 (+)
si:dkey-106l3.7 LOC106563357 coding downstream 26575 35659228 ~ 35667190 (+)
sppl3 LOC106565002 coding downstream 191560 35824213 ~ 35862626 (+)
kcnn2 LOC106564970 coding downstream 297461 35930114 ~ 35960310 (+)
drg1 drg1 coding downstream 330548 35963201 ~ 35966744 (+)
G394728 NA non-coding upstream 1585 35630641 ~ 35630854 (+)
G394722 NA non-coding upstream 8386 35623839 ~ 35624053 (+)
G394472 NA non-coding upstream 32980 35597628 ~ 35599459 (+)
G394475 NA non-coding upstream 35915 35560525 ~ 35596524 (+)
G394473 NA non-coding upstream 150727 35480908 ~ 35481712 (+)
G394746 NA non-coding downstream 36782 35669435 ~ 35669708 (+)
G394747 NA non-coding downstream 37250 35669903 ~ 35670207 (+)
G394753 NA non-coding downstream 49369 35682022 ~ 35682653 (+)
G394757 sglt1 non-coding downstream 53853 35686506 ~ 35692482 (+)
G394767 NA non-coding downstream 67828 35700481 ~ 35700754 (+)
G392776 NA other upstream 1483738 34147474 ~ 34150795 (+)
G391805 NA other upstream 2271098 33360957 ~ 33361341 (+)
G391513 LOC100136561 other upstream 2469459 33158826 ~ 33162980 (+)
G390393 NA other upstream 3411906 32220181 ~ 32220533 (+)
G390184 NA other upstream 3671694 31960355 ~ 31960745 (+)
G394882 NA other downstream 272459 35905112 ~ 35905781 (+)
G394910 NA other downstream 334284 35966937 ~ 36004829 (+)
you2 you2 other downstream 400607 36033260 ~ 36034806 (+)
G395005 LOC106564805 other downstream 570248 36202901 ~ 36206616 (+)
G395034 NA other downstream 647647 36280300 ~ 36301290 (+)

Expression


Co-expression Network