G395041 (nfkbil1)


Basic Information

Item Value
gene id G395041
gene name nfkbil1
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 36260151 ~ 36261227 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU448227
ACaggttatttatttttaattaatttgaaaAATGTAACAAGGCAAACACCTATTCCCTCTAGCAACATCATCTCTTACATCAGTgaagtacacaacacaacactgtgaAATATGGCATTCACTCAACACTTTGGCATGGTGACAAGAATAAGAAGCATAGCCAAGTTTATCCAAGAAATTAGGTGCTTCAAGTGGAAATTAGTTTTGACAGATCAAAATGACTGACCACCACTGCAAACATAACCCCTGCCCTGCATGTACAGGACCGTGAGTGGCTAAACGACAGACTGTTCAACATCTCATAAGGTCCTTTCCAGTCTGACATTGTCACCTGAGGCTCTGAGCCAGTCTATTGAGCTCCTGTGAGAGAGCAGTGACAGTTTCCAGGatcctctgcttgtctccctcctCCAGCCGGGTCCCACAGCGCTGGGCAAACCTATCCGGGTGCCAAACGGTCTGCTGGCGCCTGAGGAGTTTACGGAACACTGGCATGTCTTTCCTATCTGCACCATGCAGCATCACctccaccatctcctccactGAGCCCTTTGGTGCCGGCCAGGGGATGTCCCGATAACTCAGTTTTGTTGTGGCCGCTGCTGCAGTGTCCGTGTTGAAGGTATCTGCACATCGCTCCTCGTAGCGCCGCTTCTTCCCCTGGTGCATTTCCTCCTCTTTCCGTGCGGCACGCGCCAGGTACTCTTCATGCTCCCTCTGTAGCCTCTCATGCAGCTCTCTGTTAGCCCGATCCTCCTCATCcgcctctttcttcctcttcccatGAAAACCTGAGGATGCCAGTCTTTGAGCCTCTGCATGCTGTTTAGTGACATACTCCTGTCTAATTCTATCTGCCCAGTCTTGAAAGTCCTCCTCATCGGTATCTTCCGCAAATAAATCATCATCATATTGTCCAAATGTTTCAAAAAACTCATCCTGGCATTCCCCAAAGAGCTTCTCTTGCCACTCTTTCTCAGCGTCTGTCGCTTTTGAAGAC

Function

symbol description
nfkbil1 Predicted to act upstream of or within I-kappaB kinase/NF-kappaB signaling. Predicted to be located in nucleus. Human ortholog(s) of this gene implicated in rheumatoid arthritis. Orthologous to human NFKBIL1 (NFKB inhibitor like 1).

NR:

description
NF-kappa-B inhibitor-like protein 1 isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU448227 True 1000 lncRNA 0.49 2 36260151 36261227

Neighbor

gene id symbol gene type direction distance location
LOC110523692 LOC106564846 coding upstream 140046 36085124 ~ 36120105 (+)
LOC110523693 ggcx coding upstream 204116 36042518 ~ 36056035 (+)
you2 you2 coding upstream 225345 36033260 ~ 36034806 (+)
slc20a1b LOC106564912 coding upstream 240797 36006206 ~ 36019354 (+)
drg1 drg1 coding upstream 293407 35963201 ~ 35966744 (+)
LOC110523704 LOC100136432 coding downstream 110139 36371366 ~ 36376388 (+)
LOC110523708 LOC106564755 coding downstream 197575 36458802 ~ 36469839 (+)
antxr1b LOC105014916 coding downstream 258178 36519405 ~ 36569643 (+)
LOC110523711 LOC106564742 coding downstream 346175 36607402 ~ 36614580 (+)
LOC110523714 LOC106565816 coding downstream 378429 36639656 ~ 36645198 (+)
G394970 LOC106563191 non-coding upstream 138220 36120306 ~ 36121931 (+)
G394958 NA non-coding upstream 151266 36099373 ~ 36108885 (+)
G394904 NA non-coding upstream 224806 35943336 ~ 36035345 (+)
G394923 NA non-coding upstream 276420 35977856 ~ 35983731 (+)
G394885 NA non-coding upstream 341298 35908309 ~ 35918853 (+)
G395035 NA non-coding downstream 21504 36282731 ~ 36288452 (+)
G395062 NA non-coding downstream 41223 36302450 ~ 36302649 (+)
G395087 NA non-coding downstream 73925 36335152 ~ 36336353 (+)
G395109 NA non-coding downstream 105388 36366615 ~ 36367808 (+)
G395110 NA non-coding downstream 107456 36368683 ~ 36368972 (+)
G395005 LOC106564805 other upstream 53535 36202901 ~ 36206616 (+)
G394910 NA other upstream 255322 35966937 ~ 36004829 (+)
G394882 NA other upstream 354370 35905112 ~ 35905781 (+)
G392776 NA other upstream 2111450 34147474 ~ 34150795 (+)
G395034 NA other downstream 19073 36280300 ~ 36301290 (+)
G396022 kdm2b other downstream 703857 36965084 ~ 36965652 (+)
m17 m17 other downstream 1147974 37409195 ~ 37411565 (+)
srsf9 sfrs9 other downstream 1657467 37917781 ~ 37921282 (+)
LOC110523777 LOC106563114 other downstream 3053107 39297942 ~ 39317727 (+)

Expression


Co-expression Network