G395110


Basic Information

Item Value
gene id G395110
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 36368683 ~ 36368972 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU448300
acaatgcaaatagtccaggtagccatttaattacctgttcaggagtcttatggcttggtggtaactgttgagaagcctttttttcctagacttggcactccggtactgcttgccatacggtagtagagagaacagtctatgactgaggtggctggggtctttgacattttttagggccttcctctgacaccgcctggtgtagaggtcctggatgacaggcagcttagccctagtgatgtgctgggccatacgcactaccctctgtaatgccttgtggttggaggccgagc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU448300 True 290 lncRNA 0.50 1 36368683 36368972

Neighbor

gene id symbol gene type direction distance location
LOC110523692 LOC106564846 coding upstream 248578 36085124 ~ 36120105 (+)
LOC110523693 ggcx coding upstream 312648 36042518 ~ 36056035 (+)
you2 you2 coding upstream 333877 36033260 ~ 36034806 (+)
slc20a1b LOC106564912 coding upstream 349329 36006206 ~ 36019354 (+)
drg1 drg1 coding upstream 401939 35963201 ~ 35966744 (+)
LOC110523704 LOC100136432 coding downstream 2394 36371366 ~ 36376388 (+)
LOC110523708 LOC106564755 coding downstream 89830 36458802 ~ 36469839 (+)
antxr1b LOC105014916 coding downstream 150433 36519405 ~ 36569643 (+)
LOC110523711 LOC106564742 coding downstream 238430 36607402 ~ 36614580 (+)
LOC110523714 LOC106565816 coding downstream 270684 36639656 ~ 36645198 (+)
G395109 NA non-coding upstream 875 36366615 ~ 36367808 (+)
G395087 NA non-coding upstream 32330 36335152 ~ 36336353 (+)
G395062 NA non-coding upstream 66034 36302450 ~ 36302649 (+)
G395035 NA non-coding upstream 80231 36282731 ~ 36288452 (+)
G395041 nfkbil1 non-coding upstream 107456 36260151 ~ 36261227 (+)
G395119 NA non-coding downstream 16778 36385750 ~ 36401357 (+)
G395124 NA non-coding downstream 33492 36402464 ~ 36403209 (+)
G395133 NA non-coding downstream 36565 36405537 ~ 36405748 (+)
G395140 NA non-coding downstream 46118 36415090 ~ 36415453 (+)
G395141 NA non-coding downstream 47722 36416694 ~ 36416926 (+)
G395034 NA other upstream 67393 36280300 ~ 36301290 (+)
G395005 LOC106564805 other upstream 162067 36202901 ~ 36206616 (+)
G394910 NA other upstream 363854 35966937 ~ 36004829 (+)
G394882 NA other upstream 462902 35905112 ~ 35905781 (+)
G396022 kdm2b other downstream 596112 36965084 ~ 36965652 (+)
m17 m17 other downstream 1040229 37409195 ~ 37411565 (+)
srsf9 sfrs9 other downstream 1549722 37917781 ~ 37921282 (+)
LOC110523777 LOC106563114 other downstream 2945362 39297942 ~ 39317727 (+)
G399169 gpat3 other downstream 3393144 39762116 ~ 39765843 (+)

Expression


Co-expression Network