G395748


Basic Information

Item Value
gene id G395748
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 36695208 ~ 36696447 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU449047
tagaacatcagttaaaggtgggtgaggtgtccacaggtagaacaccagttaaaggtgggtgaggtgtccacaggtagaacatcagttaaaggtgggtgaggtgcccacaggtagaacatcagttaaaggtgggtgaggtgtccacaggtagaacatcagttaaaggtgggtgaggtgtccacaggtagaacatcagttaaaggtgggtgaggtgtccacaggtagaacatcagttaaaggtgggtgaggtgcccacaggtagaacaccagttaaaggtgagtgaggtgcccacaggt
>TU449048
caggtagaacaccagttaaaggtgggtgaggtgtccacaggtagaacatcagttaaaggtgggtgaggtgcccacaggtagaacatcagttaaaggtgggtgaggtgcccacaggtagaacatcagttaaaggtgggtgaggtgcccacaggtagaacatcagttaaaggtgggtgaggtgtccacaggtagaacatcagttaaaggtgggtgaggtgtccacaggtagaacatcagttaaaggtgggtgaggtgcccacaggtagaacaccagttaaaggtgagtgaggtgcccacaggt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU449047 False 297 lncRNA 0.50 4 36695208 36696447
TU449048 True 301 lncRNA 0.51 3 36695349 36696447

Neighbor

gene id symbol gene type direction distance location
LOC110522857 NA coding upstream 43458 36649948 ~ 36651750 (+)
LOC110523714 LOC106565816 coding upstream 50010 36639656 ~ 36645198 (+)
LOC110523711 LOC106564742 coding upstream 80628 36607402 ~ 36614580 (+)
antxr1b LOC105014916 coding upstream 125565 36519405 ~ 36569643 (+)
LOC110523708 LOC106564755 coding upstream 225369 36458802 ~ 36469839 (+)
ggt5b ggt5 coding downstream 100916 36797363 ~ 36805752 (+)
lrrc75bb LOC106564666 coding downstream 132029 36828476 ~ 36883225 (+)
LOC110523723 rnf34 coding downstream 235290 36931737 ~ 36957641 (+)
LOC110523726 LOC105014888 coding downstream 331784 37028231 ~ 37032623 (+)
LOC100653458 LOC106564569 coding downstream 343214 37039661 ~ 37048058 (+)
G395677 NA non-coding upstream 109329 36582772 ~ 36585879 (+)
G395672 NA non-coding upstream 118008 36573739 ~ 36577200 (+)
G395641 LOC106565823 non-coding upstream 186930 36508033 ~ 36508278 (+)
G395184 NA non-coding upstream 210987 36483995 ~ 36484221 (+)
G395888 NA non-coding downstream 47125 36743572 ~ 36748524 (+)
G395972 NA non-coding downstream 174371 36870818 ~ 36871028 (+)
G396058 NA non-coding downstream 309206 37005653 ~ 37036550 (+)
G396069 NA non-coding downstream 351914 37048361 ~ 37048706 (+)
G395034 NA other upstream 393918 36280300 ~ 36301290 (+)
G395005 LOC106564805 other upstream 488592 36202901 ~ 36206616 (+)
you2 you2 other upstream 660441 36033260 ~ 36034806 (+)
G394910 NA other upstream 690379 35966937 ~ 36004829 (+)
G394882 NA other upstream 789427 35905112 ~ 35905781 (+)
G396022 kdm2b other downstream 268637 36965084 ~ 36965652 (+)
m17 m17 other downstream 712754 37409195 ~ 37411565 (+)
srsf9 sfrs9 other downstream 1222247 37917781 ~ 37921282 (+)
LOC110523777 LOC106563114 other downstream 2617887 39297942 ~ 39317727 (+)
G399169 gpat3 other downstream 3065669 39762116 ~ 39765843 (+)

Expression


Co-expression Network