G396150


Basic Information

Item Value
gene id G396150
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 37207479 ~ 37207757 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU449507
CAAATATACAAAGTATTAGGACCTCAACTGACCATCACACCAAGGTCAGTTTATTATCTGAAGTAAAAACTTCATTTACATTGCCAAAACCTTCTGAAATGCACATAGTGAGCATTTACGTCCAATGGGCCTGTGTGTCATCACAGTAACTAGCGCTATGACACAGAAATGTGATACCATGTCCTTAACAGCAcatgccttcagaaaatattcacaccccttgactttttccacattttattgtgttacagcctgaatttaaaatggatttaattgagt

Function

NR:

description
PREDICTED: apoptosis-inducing factor 3-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU449507 True 279 lncRNA 0.37 1 37207479 37207757

Neighbor

gene id symbol gene type direction distance location
iscub iscub coding upstream 46157 37157288 ~ 37161322 (+)
LOC110523741 LOC106564493 coding upstream 70811 37134748 ~ 37136668 (+)
LOC110523740 LOC106564460 coding upstream 97221 37108949 ~ 37110258 (+)
LOC110523727 setd1b coding upstream 122929 37061185 ~ 37084550 (+)
LOC100653458 LOC106564569 coding upstream 159421 37039661 ~ 37048058 (+)
myo1hb kctd10 coding downstream 62636 37270393 ~ 37287020 (+)
LOC110523733 LOC106564357 coding downstream 126343 37334100 ~ 37358524 (+)
LOC110523745 hspb1 coding downstream 166737 37374494 ~ 37376343 (+)
LOC110523739 LOC104958930 coding downstream 177078 37384835 ~ 37390026 (+)
m17 m17 coding downstream 201438 37409195 ~ 37411565 (+)
G396149 cor1c non-coding upstream 2016 37202467 ~ 37205463 (+)
G396141 NA non-coding upstream 23282 37183080 ~ 37184197 (+)
G396139 NA non-coding upstream 25860 37181391 ~ 37181619 (+)
G396132 NA non-coding upstream 36128 37171147 ~ 37171351 (+)
G396126 NA non-coding upstream 49110 37158164 ~ 37158369 (+)
G396151 NA non-coding downstream 69 37207826 ~ 37208031 (+)
G396590 NA non-coding downstream 169051 37376808 ~ 37378299 (+)
G396591 NA non-coding downstream 171396 37379153 ~ 37379387 (+)
G396602 NA non-coding downstream 211187 37418944 ~ 37419346 (+)
G396022 kdm2b other upstream 241827 36965084 ~ 36965652 (+)
G395034 NA other upstream 906189 36280300 ~ 36301290 (+)
G395005 LOC106564805 other upstream 1000863 36202901 ~ 36206616 (+)
you2 you2 other upstream 1172712 36033260 ~ 36034806 (+)
G394910 NA other upstream 1202650 35966937 ~ 36004829 (+)
srsf9 sfrs9 other downstream 710937 37917781 ~ 37921282 (+)
LOC110523777 LOC106563114 other downstream 2106577 39297942 ~ 39317727 (+)
G399169 gpat3 other downstream 2554359 39762116 ~ 39765843 (+)
G399919 NA other downstream 3233998 40441755 ~ 40442086 (+)

Expression


Co-expression Network