G396666


Basic Information

Item Value
gene id G396666
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 37455898 ~ 37456191 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU450104
tcaaccacccgagccactgcctgttcaccccgctatcatccagaaggcgaggtcagtacaggtgcatcaaagttgggaccgagagactgaaaaacagcttctatctcaaggccatcagactgttaaacagccaccactaacattgagtggctgctgctaacacactgactcaactccagccactttaataatgggaattgatgggaaatgatgcaaatatatcactagccactttaaacaatgctaccttatataatgttacttacccgacattattcatctcatatgcatatg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU450104 True 294 lncRNA 0.44 1 37455898 37456191

Neighbor

gene id symbol gene type direction distance location
m17 m17 coding upstream 44333 37409195 ~ 37411565 (+)
LOC110523739 LOC104958930 coding upstream 65872 37384835 ~ 37390026 (+)
LOC110523745 hspb1 coding upstream 79555 37374494 ~ 37376343 (+)
LOC110523733 LOC106564357 coding upstream 97374 37334100 ~ 37358524 (+)
myo1hb kctd10 coding upstream 169574 37270393 ~ 37287020 (+)
LOC110523748 LOC106564295 coding downstream 64354 37520545 ~ 37549069 (+)
LOC110523751 NA coding downstream 112823 37569014 ~ 37572805 (+)
LOC110523753 LOC106564257 coding downstream 134982 37591173 ~ 37604425 (+)
trnaa-ugc-12 NA coding downstream 149986 37606177 ~ 37606250 (+)
LOC110523754 LOC106564246 coding downstream 200399 37656590 ~ 37690760 (+)
G396602 NA non-coding upstream 36552 37418944 ~ 37419346 (+)
G396591 NA non-coding upstream 76511 37379153 ~ 37379387 (+)
G396590 NA non-coding upstream 77599 37376808 ~ 37378299 (+)
G396151 NA non-coding upstream 247867 37207826 ~ 37208031 (+)
G396731 NA non-coding downstream 98421 37554612 ~ 37554811 (+)
G396735 NA non-coding downstream 100060 37556251 ~ 37556557 (+)
G396744 NA non-coding downstream 131038 37587229 ~ 37587480 (+)
G396820 NA non-coding downstream 259443 37715634 ~ 37782939 (+)
G396022 kdm2b other upstream 490246 36965084 ~ 36965652 (+)
G395034 NA other upstream 1154608 36280300 ~ 36301290 (+)
G395005 LOC106564805 other upstream 1249282 36202901 ~ 36206616 (+)
you2 you2 other upstream 1421131 36033260 ~ 36034806 (+)
srsf9 sfrs9 other downstream 462503 37917781 ~ 37921282 (+)
LOC110523777 LOC106563114 other downstream 1858143 39297942 ~ 39317727 (+)
G399169 gpat3 other downstream 2305925 39762116 ~ 39765843 (+)
G399919 NA other downstream 2985564 40441755 ~ 40442086 (+)
G400154 NA other downstream 3408738 40864929 ~ 40881126 (+)

Expression


Co-expression Network