Gene
RNA
| Item | Value |
|---|---|
| gene id | G398776 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 39615760 ~ 39615978 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU452407 | True | 219 | lncRNA | 0.45 | 1 | 39615760 | 39615978 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| mfhas1 | LOC106563686 | coding | upstream | 3157 | 39585517 ~ 39612603 (+) |
| eri1 | LOC106563692 | coding | upstream | 31232 | 39581792 ~ 39584528 (+) |
| LOC110523785 | LOC106563715 | coding | upstream | 38379 | 39572758 ~ 39577381 (+) |
| il7r | LOC106563758 | coding | upstream | 93891 | 39510282 ~ 39521869 (+) |
| myo5b | LOC106563782 | coding | upstream | 113120 | 39411380 ~ 39502640 (+) |
| rl17 | LOC106563677 | coding | downstream | 1548 | 39617526 ~ 39622863 (+) |
| LOC118964759 | NA | coding | downstream | 2229 | 39618207 ~ 39618276 (+) |
| LOC118964757 | NA | coding | downstream | 3132 | 39619110 ~ 39619179 (+) |
| LOC118964760 | NA | coding | downstream | 3539 | 39619517 ~ 39619577 (+) |
| LOC118964758 | NA | coding | downstream | 6639 | 39622617 ~ 39622686 (+) |
| G398717 | NA | non-coding | upstream | 109397 | 39506034 ~ 39506363 (+) |
| G398635 | NA | non-coding | upstream | 276562 | 39317270 ~ 39339198 (+) |
| G398571 | NA | non-coding | upstream | 295522 | 39319692 ~ 39320238 (+) |
| G398577 | NA | non-coding | upstream | 331358 | 39283586 ~ 39284402 (+) |
| G398548 | LOC106563918 | non-coding | upstream | 414273 | 39198861 ~ 39201487 (+) |
| nkx6.1 | nkx6-1 | non-coding | downstream | 18673 | 39631643 ~ 39635104 (+) |
| G399097 | NA | non-coding | downstream | 30544 | 39646522 ~ 39646795 (+) |
| G399110 | NA | non-coding | downstream | 43727 | 39659705 ~ 39659922 (+) |
| G399119 | NA | non-coding | downstream | 53187 | 39669165 ~ 39669387 (+) |
| G399177 | NA | non-coding | downstream | 143007 | 39758985 ~ 39759234 (+) |
| LOC110523777 | LOC106563114 | other | upstream | 298045 | 39297942 ~ 39317727 (+) |
| srsf9 | sfrs9 | other | upstream | 1694524 | 37917781 ~ 37921282 (+) |
| m17 | m17 | other | upstream | 2204861 | 37409195 ~ 37411565 (+) |
| G396022 | kdm2b | other | upstream | 2650108 | 36965084 ~ 36965652 (+) |
| G395034 | NA | other | upstream | 3314470 | 36280300 ~ 36301290 (+) |
| G399169 | gpat3 | other | downstream | 146138 | 39762116 ~ 39765843 (+) |
| G399919 | NA | other | downstream | 825777 | 40441755 ~ 40442086 (+) |
| G400154 | NA | other | downstream | 1248951 | 40864929 ~ 40881126 (+) |
| G400267 | LOC106561151 | other | downstream | 1489546 | 41105524 ~ 41106754 (+) |
| LOC110523840 | LOC106562575 | other | downstream | 1746018 | 41343546 ~ 41370262 (+) |
