Gene
RNA
| Item | Value |
|---|---|
| gene id | G399919 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 40441755 ~ 40442086 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| tankyrase-1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU453661 | True | 287 | TUCP | 0.67 | 2 | 40441755 | 40442086 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523806 | LOC106563492 | coding | upstream | 15464 | 40419533 ~ 40426291 (+) |
| LOC110523805 | LOC106563511 | coding | upstream | 168648 | 40258048 ~ 40273107 (+) |
| LOC110523804 | LOC106563502 | coding | upstream | 186101 | 40249873 ~ 40255654 (+) |
| atp5me | NA | coding | upstream | 233460 | 40206970 ~ 40208295 (+) |
| fybb | LOC106563559 | coding | upstream | 240550 | 40191185 ~ 40201205 (+) |
| LOC110523808 | LOC106563467 | coding | downstream | 110078 | 40552164 ~ 40553128 (+) |
| carm1l | LOC106563444 | coding | downstream | 149297 | 40591383 ~ 40600953 (+) |
| pum3 | k0020 | coding | downstream | 159049 | 40601135 ~ 40613837 (+) |
| spp1 | LOC106563403 | coding | downstream | 260521 | 40702607 ~ 40706844 (+) |
| ppp3ccb | pp2bc | coding | downstream | 285376 | 40727462 ~ 40755792 (+) |
| G399849 | NA | non-coding | upstream | 104102 | 40335781 ~ 40337653 (+) |
| G399776 | NA | non-coding | upstream | 166079 | 40274696 ~ 40275676 (+) |
| G399653 | NA | non-coding | upstream | 200518 | 40236692 ~ 40241237 (+) |
| G399681 | NA | non-coding | upstream | 224726 | 40215623 ~ 40217029 (+) |
| G400011 | NA | non-coding | downstream | 148524 | 40590610 ~ 40590967 (+) |
| G400074 | NA | non-coding | downstream | 313798 | 40755884 ~ 40804153 (+) |
| G400146 | NA | non-coding | downstream | 406316 | 40848402 ~ 40848725 (+) |
| G400148 | NA | non-coding | downstream | 408962 | 40851048 ~ 40874951 (+) |
| G400117 | NA | non-coding | downstream | 474304 | 40916390 ~ 40917013 (+) |
| G399169 | gpat3 | other | upstream | 675912 | 39762116 ~ 39765843 (+) |
| LOC110523777 | LOC106563114 | other | upstream | 1124040 | 39297942 ~ 39317727 (+) |
| srsf9 | sfrs9 | other | upstream | 2520519 | 37917781 ~ 37921282 (+) |
| m17 | m17 | other | upstream | 3030856 | 37409195 ~ 37411565 (+) |
| G396022 | kdm2b | other | upstream | 3476103 | 36965084 ~ 36965652 (+) |
| G400154 | NA | other | downstream | 422843 | 40864929 ~ 40881126 (+) |
| G400267 | LOC106561151 | other | downstream | 663438 | 41105524 ~ 41106754 (+) |
| LOC110523840 | LOC106562575 | other | downstream | 919910 | 41343546 ~ 41370262 (+) |
| G400632 | NA | other | downstream | 1327954 | 41770040 ~ 41770362 (+) |
| G400681 | NA | other | downstream | 1510537 | 41952623 ~ 41957094 (+) |
