G414488 (LOC106562530)


Basic Information

Item Value
gene id G414488
gene name LOC106562530
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 53112183 ~ 53112507 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU469816
gactatttcacctcaggcaggagaggaggagcgcccaggattacgcgctggagttccggaccttggcagccggatctgggtggaacgacagggccctcatggaccactacaggtgtagtctccgagaggacgtccgccgggagttagcgtgtcgggacaccactctgtcactggatcagctgattgacatgtccattcgactggataatctgctggctgcccgcgggcgttcagagagggtcctgtgcgttccaccacccagcccctccgctcccattccgatggagttgggaggggctgcgccgaggggtaccggaggaggagg

Function

NR:

description
growth/differentiation factor 10-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU469816 True 325 TUCP 0.63 1 53112183 53112507

Neighbor

gene id symbol gene type direction distance location
LOC118964714 NA coding upstream 216066 52875720 ~ 52896117 (+)
LOC110524018 LOC105026225 coding upstream 849127 52254713 ~ 52263056 (+)
LOC118964618 NA coding upstream 863288 52246773 ~ 52248895 (+)
LOC110524017 ftsj3 coding upstream 876887 52230095 ~ 52235296 (+)
plaat1 LOC106613501 coding upstream 882162 52222828 ~ 52230021 (+)
opa1 LOC106613511 coding downstream 291262 53403769 ~ 53462256 (+)
LOC110524030 LOC106613513 coding downstream 504020 53616527 ~ 53618565 (+)
LOC110524032 LOC106613514 coding downstream 654263 53766770 ~ 53801558 (+)
LOC110524034 LOC106613518 coding downstream 715448 53827955 ~ 53923888 (+)
LOC110524036 LOC106573996 coding downstream 816759 53929266 ~ 53940832 (+)
G414482 NA non-coding upstream 6858 53105035 ~ 53105325 (+)
G414291 NA non-coding upstream 150741 52961212 ~ 52961442 (+)
G414286 NA non-coding upstream 154666 52956795 ~ 52957517 (+)
G414266 NA non-coding upstream 166477 52945420 ~ 52945706 (+)
G414257 NA non-coding upstream 173217 52938740 ~ 52938966 (+)
G414491 NA non-coding downstream 3960 53116467 ~ 53116828 (+)
G414492 NA non-coding downstream 5108 53117615 ~ 53117916 (+)
G414499 NA non-coding downstream 10703 53123210 ~ 53123507 (+)
G414549 NA non-coding downstream 44673 53157180 ~ 53157517 (+)
G414559 NA non-coding downstream 51501 53164008 ~ 53164248 (+)
G414041 NA other upstream 332704 52778517 ~ 52779479 (+)
G414007 NA other upstream 350454 52761389 ~ 52761729 (+)
G412859 NA other upstream 1309363 51802250 ~ 51802820 (+)
camsap2a camsap2 other upstream 1973799 51059834 ~ 51153381 (+)
G411519 NA other upstream 2448543 50662872 ~ 50663640 (+)
G415582 LOC106584099 other downstream 1065422 54177929 ~ 54183430 (+)
G415808 NA other downstream 1216688 54329195 ~ 54329780 (+)
G415809 NA other downstream 1217573 54330080 ~ 54330480 (+)
mutyh mutyh other downstream 1234029 54346481 ~ 54395448 (+)
G415946 NA other downstream 1477567 54590074 ~ 54613142 (+)

Expression


Co-expression Network