Gene
RNA
| Item | Value |
|---|---|
| gene id | G417147 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 55775015 ~ 55775224 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU472851 | True | 210 | lncRNA | 0.35 | 1 | 55775015 | 55775224 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524077 | tm2d1 | coding | upstream | 270274 | 55487820 ~ 55504741 (+) |
| LOC110524076 | LOC106613559 | coding | upstream | 506655 | 55257674 ~ 55268360 (+) |
| LOC110524074 | tal1 | coding | upstream | 519902 | 55242498 ~ 55255113 (+) |
| LOC110524073 | LOC106613986 | coding | upstream | 535354 | 55237867 ~ 55239661 (+) |
| LOC118964621 | LOC106613552 | coding | upstream | 677758 | 55082899 ~ 55097257 (+) |
| LOC110524079 | atpaf1 | coding | downstream | 51983 | 55827207 ~ 55838164 (+) |
| LOC110524081 | rab3b | coding | downstream | 63336 | 55838512 ~ 55848072 (+) |
| LOC110524082 | LOC106613566 | coding | downstream | 73989 | 55849213 ~ 55864861 (+) |
| LOC110524084 | LOC106613569 | coding | downstream | 109655 | 55884879 ~ 55921055 (+) |
| LOC110524085 | LOC106613570 | coding | downstream | 157753 | 55932977 ~ 56105281 (+) |
| G417145 | NA | non-coding | upstream | 4282 | 55770500 ~ 55770733 (+) |
| G417144 | NA | non-coding | upstream | 5110 | 55769676 ~ 55769905 (+) |
| G417092 | NA | non-coding | upstream | 36650 | 55736656 ~ 55738365 (+) |
| G417093 | NA | non-coding | upstream | 40663 | 55733942 ~ 55734352 (+) |
| G417095 | NA | non-coding | upstream | 43293 | 55731362 ~ 55731722 (+) |
| G417151 | NA | non-coding | downstream | 7952 | 55783176 ~ 55783667 (+) |
| G417212 | NA | non-coding | downstream | 112813 | 55888037 ~ 55945283 (+) |
| G417864 | NA | non-coding | downstream | 429720 | 56204944 ~ 56205176 (+) |
| G417876 | NA | non-coding | downstream | 443557 | 56218781 ~ 56219103 (+) |
| G416857 | NA | other | upstream | 449744 | 55324645 ~ 55325271 (+) |
| G415946 | NA | other | upstream | 1161873 | 54590074 ~ 54613142 (+) |
| mutyh | mutyh | other | upstream | 1424400 | 54346481 ~ 54395448 (+) |
| G415809 | NA | other | upstream | 1444535 | 54330080 ~ 54330480 (+) |
| G415808 | NA | other | upstream | 1445235 | 54329195 ~ 54329780 (+) |
| G418077 | LOC106613582 | other | downstream | 842666 | 56617890 ~ 56628617 (+) |
| G418119 | LOC106613588 | other | downstream | 950961 | 56726185 ~ 56729821 (+) |
| G418251 | rtca | other | downstream | 1148700 | 56923924 ~ 56925176 (+) |
| LOC100135807 | LOC106613594 | other | downstream | 1168614 | 56943838 ~ 56958165 (+) |
| LOC110524119 | LOC106613607 | other | downstream | 1590140 | 57352343 ~ 57367627 (+) |
