G417969


Basic Information

Item Value
gene id G417969
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 56411403 ~ 56411610 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU473738
aacatctgctaaccatgtgtatgtgacaaataaaatttgatttgatttgatttattaaccagaccctgtagcccccagttctacacctattccccaggcgctctaaTTTGTTTATTTCTGTAACCGtaacagccttggtttcatgcatgttaacatcagaagcctcctccctaagattattttattcactgctttagcacactcagcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU473738 True 208 lncRNA 0.39 1 56411403 56411610

Neighbor

gene id symbol gene type direction distance location
LOC110524085 LOC106613570 coding upstream 306122 55932977 ~ 56105281 (+)
LOC110524087 LOC106613571 coding upstream 389870 56013137 ~ 56021533 (+)
LOC110524084 LOC106613569 coding upstream 490348 55884879 ~ 55921055 (+)
LOC110524082 LOC106613566 coding upstream 546542 55849213 ~ 55864861 (+)
LOC110524081 rab3b coding upstream 563331 55838512 ~ 55848072 (+)
LOC110524091 LOC106613578 coding downstream 93934 56505544 ~ 56525588 (+)
LOC110524094 LOC106613581 coding downstream 173598 56585208 ~ 56593281 (+)
stil stil coding downstream 220186 56631796 ~ 56647090 (+)
rc3h1a LOC106613585 coding downstream 247311 56658921 ~ 56688589 (+)
serpinc1 LOC106613587 coding downstream 285008 56696618 ~ 56702156 (+)
G417968 NA non-coding upstream 1002 56410170 ~ 56410401 (+)
G417883 NA non-coding upstream 167612 56226865 ~ 56243791 (+)
G417882 NA non-coding upstream 167993 56240815 ~ 56243410 (+)
G417876 NA non-coding upstream 192300 56218781 ~ 56219103 (+)
G417864 NA non-coding upstream 206227 56204944 ~ 56205176 (+)
G417977 NA non-coding downstream 15690 56427300 ~ 56427530 (+)
G417983 NA non-coding downstream 24007 56435617 ~ 56435981 (+)
G417991 NA non-coding downstream 49174 56460784 ~ 56465861 (+)
G417989 NA non-coding downstream 59435 56471045 ~ 56473135 (+)
G418007 LOC106613576 non-coding downstream 66153 56477763 ~ 56478566 (+)
G416857 NA other upstream 1086132 55324645 ~ 55325271 (+)
G415946 NA other upstream 1798261 54590074 ~ 54613142 (+)
mutyh mutyh other upstream 2060788 54346481 ~ 54395448 (+)
G415809 NA other upstream 2080923 54330080 ~ 54330480 (+)
G415808 NA other upstream 2081623 54329195 ~ 54329780 (+)
G418077 LOC106613582 other downstream 206280 56617890 ~ 56628617 (+)
G418119 LOC106613588 other downstream 314575 56726185 ~ 56729821 (+)
G418251 rtca other downstream 512314 56923924 ~ 56925176 (+)
LOC100135807 LOC106613594 other downstream 532228 56943838 ~ 56958165 (+)
LOC110524119 LOC106613607 other downstream 953754 57352343 ~ 57367627 (+)

Expression


Co-expression Network