Gene
RNA
| Item | Value |
|---|---|
| gene id | G417989 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 56471045 ~ 56473135 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| polypyrimidine tract-binding protein 1-like isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU473760 | True | 472 | lncRNA | 0.41 | 2 | 56471045 | 56473135 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524085 | LOC106613570 | coding | upstream | 365764 | 55932977 ~ 56105281 (+) |
| LOC110524087 | LOC106613571 | coding | upstream | 449512 | 56013137 ~ 56021533 (+) |
| LOC110524084 | LOC106613569 | coding | upstream | 549990 | 55884879 ~ 55921055 (+) |
| LOC110524082 | LOC106613566 | coding | upstream | 606184 | 55849213 ~ 55864861 (+) |
| LOC110524081 | rab3b | coding | upstream | 622973 | 55838512 ~ 55848072 (+) |
| LOC110524091 | LOC106613578 | coding | downstream | 32409 | 56505544 ~ 56525588 (+) |
| LOC110524094 | LOC106613581 | coding | downstream | 112073 | 56585208 ~ 56593281 (+) |
| stil | stil | coding | downstream | 158661 | 56631796 ~ 56647090 (+) |
| rc3h1a | LOC106613585 | coding | downstream | 185786 | 56658921 ~ 56688589 (+) |
| serpinc1 | LOC106613587 | coding | downstream | 223483 | 56696618 ~ 56702156 (+) |
| G417991 | NA | non-coding | upstream | 5184 | 56460784 ~ 56465861 (+) |
| G417983 | NA | non-coding | upstream | 35064 | 56435617 ~ 56435981 (+) |
| G417977 | NA | non-coding | upstream | 43515 | 56427300 ~ 56427530 (+) |
| G417969 | NA | non-coding | upstream | 59435 | 56411403 ~ 56411610 (+) |
| G417968 | NA | non-coding | upstream | 60644 | 56410170 ~ 56410401 (+) |
| G418007 | LOC106613576 | non-coding | downstream | 4628 | 56477763 ~ 56478566 (+) |
| G418063 | NA | non-coding | downstream | 120843 | 56593978 ~ 56594366 (+) |
| G418076 | kiaa1614 | non-coding | downstream | 141071 | 56614206 ~ 56616854 (+) |
| G418087 | NA | non-coding | downstream | 160718 | 56633853 ~ 56667606 (+) |
| G418176 | NA | non-coding | downstream | 353004 | 56826139 ~ 56826512 (+) |
| G416857 | NA | other | upstream | 1145774 | 55324645 ~ 55325271 (+) |
| G415946 | NA | other | upstream | 1857903 | 54590074 ~ 54613142 (+) |
| mutyh | mutyh | other | upstream | 2120430 | 54346481 ~ 54395448 (+) |
| G415809 | NA | other | upstream | 2140565 | 54330080 ~ 54330480 (+) |
| G415808 | NA | other | upstream | 2141265 | 54329195 ~ 54329780 (+) |
| G418077 | LOC106613582 | other | downstream | 144755 | 56617890 ~ 56628617 (+) |
| G418119 | LOC106613588 | other | downstream | 253050 | 56726185 ~ 56729821 (+) |
| G418251 | rtca | other | downstream | 450789 | 56923924 ~ 56925176 (+) |
| LOC100135807 | LOC106613594 | other | downstream | 470703 | 56943838 ~ 56958165 (+) |
| LOC110524119 | LOC106613607 | other | downstream | 892229 | 57352343 ~ 57367627 (+) |
