G418190


Basic Information

Item Value
gene id G418190
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 56838520 ~ 56840783 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU473986
TATTTATTAATAATGAAACAAACTTACATTCAAACACAATTCACAGAAAACAGGGAAAAACTTTTCACCGCTTCAATAGTGATTACGAACAGTCATAAACAAAACAAATTAAGTTATATACAggctttgattttttttaaaaacagctTTTTAAACACGTACCAAACCGGCTCTCATATCCCACAAAATTTAAGTAAATGGTGGGGAACAAAAATACCCCACACACATTGCAACCTctccacacatacaaacacttcTAATAAGGGTAGCCCACATTAGAGACCTAAATAACAGTCAAAACAACGAGGCAAATACGTGTTGCTTTCATATTGTATTACATTACCACAACACTGTCTATTCCTTTCCTTGGGAAACCATAGTGTCGTTTCTGACACACATCATACTGATATAGTTCAAAGTTCATATATACAATGTCAATACATTGTATTCACTTTTTTTTAAGTTCAATTTCTTATCACTGCTAATTTCATTGTATGATTTAGTTTGAAGAAATGTAACATATTGCATTCATCCTACTGTTGTGACACTTAGACATCAATGGGTTTAAATGAAAGCTGCCAAGAAATTATAATGGAGCAaattacagtgagatgcagtttGATTATTACACCTATTACAGTTTTTTTGCGTAGGTTTCTATAGAAATGGGAACCTAAGGCCCAACGGATATACACCGtaaaacacaaacatacacactaaGTCAATGtttgacacatacacacatatccaGAAGGCCCAACATCCAACCACAAAGGTGCGTCTCTATTTCTTACCCTGTTCTAGTAACTTCCAAAGGTCATAAGGCCTTGTCCCCTGTCCTTTGACTGAGGCCGTGTCTACACTGGACACTTACATGCGACTTCTGCTATCAGAATACGAAGATCGCATTGAAAAGACGGGTCTAGGCGCACAAAAGTTGCTTTGTGGTCTGATTGTGTTCAGATCGAGAGGCACCTCAAAAATCCTAGCCAACTACCTAATATTTAGACAAATTATTTTTTGTTTGACTAGAGATATGGTAACCCATTTGCAATCCCTTTAGCATTGCTTGTTAGCTTGCTGTctagctacagaggttagctgAGTAGTTAGCTACTGCCATCACTTATTGTGTATTATCATATTTAGCCTATTCCACCGTTTGTAGACTGCATACTTGCATTTGAATATAGCGCGGGAAAAGGGTATCTGTGGACACAATGGGGACGCAgtagacacatttaaatgtaggtGCAGATGCATGACATGTTCGGAATTCCATGGTCAGAACTCTATGATCAGAATACTAAAGCTGCATGAACTGTCAAGACTAGACACGGCCAAAGGCCTGGACACGGGACAATGGGCAAGGTTCTCGTCTGTAGGCCAGGAGTTCACTCCAGGTGAGTCTGTCCCTTGGTATGTCTTTACATCATGAGTGTCAAAGTCATTTTGCCTGAAGAACCATTTTTAGACAGTACATGTTCATGTTGGTAGCACAAGTGGGGGCCGTAATCTGGCTCCCGGGCCACAGGTTTTAGACTCCTCTAGTCTATGCAGTGCTGGGCTTACACTTGGCCAGCTCATAGGAGCCCTTCCTCCTGGCTCTCCTAAGATTGTCCAGGACTAGGACTGTGGTGGTCACCATCATTCCCACGCAGACAGCAGGAATGACTATCTGGTTCCAGTCAGGTGAAGGACTGGAATGCTTCTCCATGACGTTAATGCTGAAGATCTTAGTCTCGTAGCCCAGGTCATTGGTCACATTCACCTGGTATAGGCCTGTATCTTTGGGCGTAAGGTTCACCAGCAGGAAGTTCCCATCCGGGGAGTAGAGCTCTGTGCCATTGTCCAGTTTTCTCAAAACCACCACAGGTGGGGGGAAGCTAACAGAGCGACAGCATACAGTGACATTTTGGCCCTCCTGAACCTCAGTGGACGGATAGACCAGGACTGTTGTATTCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU473986 True 1965 lncRNA 0.42 2 56838520 56840783

Neighbor

gene id symbol gene type direction distance location
dph5 LOC106613590 coding upstream 49867 56779858 ~ 56788653 (+)
serpinc1 LOC106613587 coding upstream 136364 56696618 ~ 56702156 (+)
rc3h1a LOC106613585 coding upstream 149931 56658921 ~ 56688589 (+)
stil stil coding upstream 191430 56631796 ~ 56647090 (+)
LOC110524094 LOC106613581 coding upstream 245239 56585208 ~ 56593281 (+)
LOC100135807 LOC106613594 coding downstream 103060 56943838 ~ 56958165 (+)
LOC118964777 NA coding downstream 114541 56955324 ~ 56955462 (+)
LOC110524109 LOC106613599 coding downstream 175145 57015928 ~ 57037694 (+)
LOC118964761 NA coding downstream 185542 57026325 ~ 57026460 (+)
nwd1 nwd1 coding downstream 198334 57039117 ~ 57061390 (+)
G418188 NA non-coding upstream 1909 56836253 ~ 56836611 (+)
G418187 NA non-coding upstream 2463 56835767 ~ 56836057 (+)
G418184 NA non-coding upstream 4658 56833637 ~ 56833862 (+)
G418183 NA non-coding upstream 4940 56833376 ~ 56833580 (+)
G418181 NA non-coding upstream 8559 56829722 ~ 56829961 (+)
G418189 NA non-coding downstream 643 56841426 ~ 56845422 (+)
G418193 LOC100526765 non-coding downstream 5304 56846087 ~ 56847202 (+)
G418201 NA non-coding downstream 12271 56853054 ~ 56853399 (+)
G418210 NA non-coding downstream 23191 56863974 ~ 56864224 (+)
G418209 NA non-coding downstream 23706 56864489 ~ 56868205 (+)
G418119 LOC106613588 other upstream 108699 56726185 ~ 56729821 (+)
G418077 LOC106613582 other upstream 209903 56617890 ~ 56628617 (+)
G416857 NA other upstream 1513249 55324645 ~ 55325271 (+)
G415946 NA other upstream 2225378 54590074 ~ 54613142 (+)
mutyh mutyh other upstream 2487905 54346481 ~ 54395448 (+)
G418251 rtca other downstream 83141 56923924 ~ 56925176 (+)
LOC110524119 LOC106613607 other downstream 524581 57352343 ~ 57367627 (+)
G419452 NA other downstream 1043597 57884380 ~ 57899648 (+)
G420117 LOC100846954 other downstream 1572340 58411240 ~ 58418268 (+)

Expression


Co-expression Network