G419995


Basic Information

Item Value
gene id G419995
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 58141889 ~ 58142108 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU475958
gtcatgtttgctgcaaccttgtcctgtcctgtcggaatctgccggtccatctgagcctacctatgttttgtcattaaagaagctctgtttacgtttattcgcttttgggtcctcattcacgcaccgtaacagaagaatccgaccaagaatggacccagcgacttcggatcctctccactcagccgtcgagatccagggagcgatgctaggcagacacgag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU475958 True 220 lncRNA 0.51 1 58141889 58142108

Neighbor

gene id symbol gene type direction distance location
LOC110524139 lsm4 coding upstream 17491 58120065 ~ 58124398 (+)
LOC110522977 NA coding upstream 55620 58084721 ~ 58086269 (+)
LOC110524136 LOC100136537 coding upstream 110995 58028761 ~ 58030894 (+)
LOC110524134 NA coding upstream 235229 57874805 ~ 57906660 (+)
LOC110524140 LOC106613630 coding downstream 16413 58158521 ~ 58160134 (+)
LOC110524142 NA coding downstream 57279 58199387 ~ 58205370 (+)
LOC110524143 LOC106573897 coding downstream 170224 58312332 ~ 58370090 (+)
LOC118964627 NA coding downstream 259321 58401429 ~ 58404889 (+)
LOC118964530 NA coding downstream 338829 58480937 ~ 58482309 (+)
G419975 NA non-coding upstream 17150 58124669 ~ 58124739 (+)
G419989 NA non-coding upstream 30363 58109666 ~ 58111526 (+)
G419986 LOC106613627 non-coding upstream 34944 58105115 ~ 58106945 (+)
G419976 NA non-coding upstream 51414 58089993 ~ 58090475 (+)
G419979 NA non-coding upstream 52072 58089696 ~ 58089817 (+)
G419999 NA non-coding downstream 9868 58151976 ~ 58153840 (+)
G420026 NA non-coding downstream 63756 58205864 ~ 58210110 (+)
G420055 NA non-coding downstream 103882 58245990 ~ 58246538 (+)
G420062 NA non-coding downstream 127011 58269119 ~ 58269426 (+)
G420025 NA non-coding downstream 231012 58373120 ~ 58373991 (+)
G419452 NA other upstream 242241 57884380 ~ 57899648 (+)
LOC110524119 LOC106613607 other upstream 774552 57352343 ~ 57367627 (+)
LOC100135807 LOC106613594 other upstream 1183724 56943838 ~ 56958165 (+)
G418251 rtca other upstream 1216713 56923924 ~ 56925176 (+)
G418119 LOC106613588 other upstream 1412068 56726185 ~ 56729821 (+)
G420117 LOC100846954 other downstream 271015 58411240 ~ 58418268 (+)
G420634 NA other downstream 800620 58942728 ~ 58944217 (+)
LOC110524226 LOC106573564 other downstream 2552149 60694220 ~ 60695905 (+)
G423922 NA other downstream 3579429 61721537 ~ 61722024 (+)
G424079 NA other downstream 3963415 62105523 ~ 62105872 (+)

Expression


Co-expression Network