G420136


Basic Information

Item Value
gene id G420136
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 58440010 ~ 58440241 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU476123
ggtcaaaattattggcgCCCaagttttcaatactccagcaccctcccttTGCGAGGATAACAACACtgagccttcttctaaaatgttttacgagaacacattgggagagatcttagaccattcctccatacagaatcattCCAGATCCTTGATGTACTTCGTCTGTTCTTATCGATTGCCCTctaattcaaaccacaggttttcaatggggttcaactccagagactgagat

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU476123 True 232 lncRNA 0.43 1 58440010 58440241

Neighbor

gene id symbol gene type direction distance location
LOC118964627 NA coding upstream 35121 58401429 ~ 58404889 (+)
LOC110524143 LOC106573897 coding upstream 69920 58312332 ~ 58370090 (+)
LOC110524142 NA coding upstream 234640 58199387 ~ 58205370 (+)
LOC110524140 LOC106613630 coding upstream 279876 58158521 ~ 58160134 (+)
LOC110524139 lsm4 coding upstream 315612 58120065 ~ 58124398 (+)
LOC118964530 NA coding downstream 40696 58480937 ~ 58482309 (+)
LOC110524147 LOC106613637 coding downstream 43802 58484043 ~ 58493673 (+)
LOC110524149 LOC106613638 coding downstream 59864 58500105 ~ 58505933 (+)
LOC110524150 LOC106613639 coding downstream 72688 58512929 ~ 58539436 (+)
LOC110524154 NA coding downstream 139301 58579542 ~ 58620188 (+)
G420134 NA non-coding upstream 3825 58435963 ~ 58436185 (+)
G420133 NA non-coding upstream 5115 58434589 ~ 58434895 (+)
G420132 NA non-coding upstream 5506 58434255 ~ 58434504 (+)
G420122 NA non-coding upstream 16500 58423100 ~ 58423510 (+)
G420120 NA non-coding upstream 18650 58421026 ~ 58421360 (+)
G420138 NA non-coding downstream 4261 58444502 ~ 58444730 (+)
G420139 NA non-coding downstream 4706 58444947 ~ 58445250 (+)
G420144 NA non-coding downstream 14914 58455155 ~ 58455370 (+)
G420145 NA non-coding downstream 16115 58456356 ~ 58456604 (+)
G420153 NA non-coding downstream 26199 58466440 ~ 58466714 (+)
G420117 LOC100846954 other upstream 23234 58411240 ~ 58418268 (+)
G419452 NA other upstream 540362 57884380 ~ 57899648 (+)
LOC110524119 LOC106613607 other upstream 1072673 57352343 ~ 57367627 (+)
LOC100135807 LOC106613594 other upstream 1481845 56943838 ~ 56958165 (+)
G418251 rtca other upstream 1514834 56923924 ~ 56925176 (+)
G420634 NA other downstream 502487 58942728 ~ 58944217 (+)
LOC110524226 LOC106573564 other downstream 2254016 60694220 ~ 60695905 (+)
G423922 NA other downstream 3281296 61721537 ~ 61722024 (+)
G424079 NA other downstream 3665282 62105523 ~ 62105872 (+)
LOC110524265 LOC106613745 other downstream 3842911 62283054 ~ 62327772 (+)

Expression


Co-expression Network