G420155


Basic Information

Item Value
gene id G420155
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 58467992 ~ 58468196 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU476142
gagggaggagaaggtggaaaatagTTTCCTAGGGTTAAAGGAAGAAGCTTGAAATTTAGAGTGATATGAAGTAACTTTTGCAGcagatatagaggaagagaaggaagagatgagggaatgaaaggatgataggtcctccggaAGTTTCATTTTTCTAAATTTTTGCTCAGCTGcctgcagccctgttctgtaagctagCAATGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU476142 True 205 lncRNA 0.41 1 58467992 58468196

Neighbor

gene id symbol gene type direction distance location
LOC118964627 NA coding upstream 63103 58401429 ~ 58404889 (+)
LOC110524143 LOC106573897 coding upstream 97902 58312332 ~ 58370090 (+)
LOC110524142 NA coding upstream 262622 58199387 ~ 58205370 (+)
LOC110524140 LOC106613630 coding upstream 307858 58158521 ~ 58160134 (+)
LOC110524139 lsm4 coding upstream 343594 58120065 ~ 58124398 (+)
LOC118964530 NA coding downstream 12741 58480937 ~ 58482309 (+)
LOC110524147 LOC106613637 coding downstream 15847 58484043 ~ 58493673 (+)
LOC110524149 LOC106613638 coding downstream 31909 58500105 ~ 58505933 (+)
LOC110524150 LOC106613639 coding downstream 44733 58512929 ~ 58539436 (+)
LOC110524154 NA coding downstream 111346 58579542 ~ 58620188 (+)
G420153 NA non-coding upstream 1278 58466440 ~ 58466714 (+)
G420145 NA non-coding upstream 11388 58456356 ~ 58456604 (+)
G420144 NA non-coding upstream 12622 58455155 ~ 58455370 (+)
G420139 NA non-coding upstream 22742 58444947 ~ 58445250 (+)
G420138 NA non-coding upstream 23262 58444502 ~ 58444730 (+)
G420159 NA non-coding downstream 6650 58474846 ~ 58475252 (+)
G420465 NA non-coding downstream 8986 58477182 ~ 58477405 (+)
G420495 NA non-coding downstream 89192 58557388 ~ 58558448 (+)
G420511 NA non-coding downstream 109908 58578104 ~ 58578620 (+)
G420117 LOC100846954 other upstream 51216 58411240 ~ 58418268 (+)
G419452 NA other upstream 568344 57884380 ~ 57899648 (+)
LOC110524119 LOC106613607 other upstream 1100655 57352343 ~ 57367627 (+)
LOC100135807 LOC106613594 other upstream 1509827 56943838 ~ 56958165 (+)
G418251 rtca other upstream 1542816 56923924 ~ 56925176 (+)
G420634 NA other downstream 474532 58942728 ~ 58944217 (+)
LOC110524226 LOC106573564 other downstream 2226061 60694220 ~ 60695905 (+)
G423922 NA other downstream 3253341 61721537 ~ 61722024 (+)
G424079 NA other downstream 3637327 62105523 ~ 62105872 (+)
LOC110524265 LOC106613745 other downstream 3814956 62283054 ~ 62327772 (+)

Expression


Co-expression Network