G420608


Basic Information

Item Value
gene id G420608
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 58803982 ~ 58804208 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU476667
aagctggttgagataatgccaaaagtgtgcaaagctgtcaaggcaaagggtgactactttgatgaatctcaaatagaaaatatatttgattgtgttatttcataaatttgatgtcttcgctattattctacaatgtgggaaatagtaaaaataaagaaaaaccctggaatgagtaggtgtgtccacacttttgactggtactgtagtttatgAAAGTTCAATCTGGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU476667 True 227 lncRNA 0.34 1 58803982 58804208

Neighbor

gene id symbol gene type direction distance location
LOC110524163 LOC106613647 coding upstream 1319 58756244 ~ 58802663 (+)
LOC110522978 r3hdm4 coding upstream 27640 58747592 ~ 58776342 (+)
LOC110524162 LOC106613646 coding upstream 67990 58726531 ~ 58735992 (+)
LOC110524161 LOC106613992 coding upstream 93002 58699995 ~ 58710980 (+)
LOC110524157 LOC106613644 coding upstream 104090 58674258 ~ 58699892 (+)
LOC110524164 LOC106613648 coding downstream 4362 58808570 ~ 58828505 (+)
LOC110524166 LOC100194687 coding downstream 38241 58842449 ~ 58849428 (+)
LOC110524168 LOC106613649 coding downstream 58861 58863069 ~ 58878412 (+)
LOC110522979 NA coding downstream 84006 58888214 ~ 58900154 (+)
LOC110524169 LOC106613650 coding downstream 107701 58911909 ~ 58936361 (+)
G420606 NA non-coding upstream 889 58802894 ~ 58803093 (+)
G420545 NA non-coding upstream 124118 58679586 ~ 58679864 (+)
LOC110524159 NA non-coding upstream 134007 58661910 ~ 58669975 (+)
LOC110524153 LOC106613641 non-coding upstream 160451 58620518 ~ 58646110 (+)
LOC110524154 NA non-coding upstream 183794 58579542 ~ 58620188 (+)
G420610 NA non-coding downstream 871 58805079 ~ 58805298 (+)
G420621 NA non-coding downstream 27180 58831388 ~ 58831587 (+)
G420622 NA non-coding downstream 28183 58832391 ~ 58832640 (+)
G420629 NA non-coding downstream 53437 58857645 ~ 58857865 (+)
G420642 NA non-coding downstream 92692 58896900 ~ 58897108 (+)
G420117 LOC100846954 other upstream 387206 58411240 ~ 58418268 (+)
G419452 NA other upstream 904334 57884380 ~ 57899648 (+)
LOC110524119 LOC106613607 other upstream 1436645 57352343 ~ 57367627 (+)
LOC100135807 LOC106613594 other upstream 1845817 56943838 ~ 56958165 (+)
G418251 rtca other upstream 1878806 56923924 ~ 56925176 (+)
G420634 NA other downstream 138520 58942728 ~ 58944217 (+)
LOC110524226 LOC106573564 other downstream 1890049 60694220 ~ 60695905 (+)
G423922 NA other downstream 2917329 61721537 ~ 61722024 (+)
G424079 NA other downstream 3301315 62105523 ~ 62105872 (+)
LOC110524265 LOC106613745 other downstream 3478944 62283054 ~ 62327772 (+)

Expression


Co-expression Network