Gene
RNA
| Item | Value |
|---|---|
| gene id | G420610 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 58805079 ~ 58805298 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU476669 | True | 220 | lncRNA | 0.35 | 1 | 58805079 | 58805298 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524163 | LOC106613647 | coding | upstream | 2416 | 58756244 ~ 58802663 (+) |
| LOC110522978 | r3hdm4 | coding | upstream | 28737 | 58747592 ~ 58776342 (+) |
| LOC110524162 | LOC106613646 | coding | upstream | 69087 | 58726531 ~ 58735992 (+) |
| LOC110524161 | LOC106613992 | coding | upstream | 94099 | 58699995 ~ 58710980 (+) |
| LOC110524157 | LOC106613644 | coding | upstream | 105187 | 58674258 ~ 58699892 (+) |
| LOC110524164 | LOC106613648 | coding | downstream | 3272 | 58808570 ~ 58828505 (+) |
| LOC110524166 | LOC100194687 | coding | downstream | 37151 | 58842449 ~ 58849428 (+) |
| LOC110524168 | LOC106613649 | coding | downstream | 57771 | 58863069 ~ 58878412 (+) |
| LOC110522979 | NA | coding | downstream | 82916 | 58888214 ~ 58900154 (+) |
| LOC110524169 | LOC106613650 | coding | downstream | 106611 | 58911909 ~ 58936361 (+) |
| G420608 | NA | non-coding | upstream | 871 | 58803982 ~ 58804208 (+) |
| G420606 | NA | non-coding | upstream | 1986 | 58802894 ~ 58803093 (+) |
| G420545 | NA | non-coding | upstream | 125215 | 58679586 ~ 58679864 (+) |
| LOC110524159 | NA | non-coding | upstream | 135104 | 58661910 ~ 58669975 (+) |
| LOC110524153 | LOC106613641 | non-coding | upstream | 161548 | 58620518 ~ 58646110 (+) |
| G420621 | NA | non-coding | downstream | 26090 | 58831388 ~ 58831587 (+) |
| G420622 | NA | non-coding | downstream | 27093 | 58832391 ~ 58832640 (+) |
| G420629 | NA | non-coding | downstream | 52347 | 58857645 ~ 58857865 (+) |
| G420642 | NA | non-coding | downstream | 91602 | 58896900 ~ 58897108 (+) |
| G420656 | NA | non-coding | downstream | 136308 | 58941606 ~ 58942640 (+) |
| G420117 | LOC100846954 | other | upstream | 388303 | 58411240 ~ 58418268 (+) |
| G419452 | NA | other | upstream | 905431 | 57884380 ~ 57899648 (+) |
| LOC110524119 | LOC106613607 | other | upstream | 1437742 | 57352343 ~ 57367627 (+) |
| LOC100135807 | LOC106613594 | other | upstream | 1846914 | 56943838 ~ 56958165 (+) |
| G418251 | rtca | other | upstream | 1879903 | 56923924 ~ 56925176 (+) |
| G420634 | NA | other | downstream | 137430 | 58942728 ~ 58944217 (+) |
| LOC110524226 | LOC106573564 | other | downstream | 1888959 | 60694220 ~ 60695905 (+) |
| G423922 | NA | other | downstream | 2916239 | 61721537 ~ 61722024 (+) |
| G424079 | NA | other | downstream | 3300225 | 62105523 ~ 62105872 (+) |
| LOC110524265 | LOC106613745 | other | downstream | 3477854 | 62283054 ~ 62327772 (+) |
