G421731


Basic Information

Item Value
gene id G421731
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 59988021 ~ 59988310 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU477889
ctccatccaacctcactgagctcgagctgttttgcaaggaggaatgggaaaaaatgtcagtctttcgatgtgcaaaactgatagagacataccccaagcgacttacagctgtatcgcagcaaaaggtgtcgctacaaagtattaacttaagggggctgaataattttgcacgcccaatttttctgtttttgatttgttaaaaaagtttgaaatatccaataaatgtcgttccgcttcatgattgtgtcccacttgttgttgattcttcacaaaaaaatacagttttatat

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU477889 True 290 lncRNA 0.38 1 59988021 59988310

Neighbor

gene id symbol gene type direction distance location
LOC110524202 NA coding upstream 19075 59930644 ~ 59968946 (+)
LOC110524200 LOC106613684 coding upstream 57478 59920588 ~ 59930543 (+)
LOC110524201 LOC106613685 coding upstream 67845 59915582 ~ 59920176 (+)
LOC110524198 LOC106613681 coding upstream 83987 59889619 ~ 59904034 (+)
LOC110524197 LOC106613680 coding upstream 107452 59869690 ~ 59880569 (+)
malt2 LOC106613687 coding downstream 144926 60133236 ~ 60161934 (+)
LOC110524208 LOC106613692 coding downstream 177298 60165608 ~ 60180274 (+)
LOC118964531 NA coding downstream 235487 60223797 ~ 60267847 (+)
LOC110524211 tpm4 coding downstream 380081 60368391 ~ 60395175 (+)
LOC110524213 LOC106613698 coding downstream 410680 60398990 ~ 60407448 (+)
G421677 NA non-coding upstream 129556 59853434 ~ 59858465 (+)
G421673 NA non-coding upstream 143000 59844379 ~ 59845021 (+)
G421672 NA non-coding upstream 146713 59840540 ~ 59841308 (+)
LOC110524196 LOC106613678 non-coding upstream 149813 59827075 ~ 59838227 (+)
LOC110524195 LOC106613677 non-coding upstream 166055 59802028 ~ 59821970 (+)
G421748 NA non-coding downstream 21045 60009355 ~ 60009830 (+)
G421788 NA non-coding downstream 89580 60077890 ~ 60078373 (+)
G421799 NA non-coding downstream 100322 60088632 ~ 60089109 (+)
G421806 NA non-coding downstream 109453 60097763 ~ 60097995 (+)
G421811 NA non-coding downstream 121292 60109602 ~ 60109909 (+)
G420634 NA other upstream 1043804 58942728 ~ 58944217 (+)
G420117 LOC100846954 other upstream 1571245 58411240 ~ 58418268 (+)
G419452 NA other upstream 2088373 57884380 ~ 57899648 (+)
LOC110524119 LOC106613607 other upstream 2620684 57352343 ~ 57367627 (+)
LOC100135807 LOC106613594 other upstream 3029856 56943838 ~ 56958165 (+)
LOC110524226 LOC106573564 other downstream 705947 60694220 ~ 60695905 (+)
G423922 NA other downstream 1733227 61721537 ~ 61722024 (+)
G424079 NA other downstream 2117213 62105523 ~ 62105872 (+)
LOC110524265 LOC106613745 other downstream 2294842 62283054 ~ 62327772 (+)
G425224 NA other downstream 3056780 63045090 ~ 63051530 (+)

Expression


Co-expression Network