G421814


Basic Information

Item Value
gene id G421814
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 60112635 ~ 60112855 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU477984
AAGCAGGGGTGCCACTACATAGAACATAGAGTAGCTTTCACAGACGGTCATGTCAAGTGATTACTTCAACAAAGGGTGGTGGAATTGATGCATTTTCAAAGTATTCAAATGTGGCCTAAACATAATGCAGTAGTTTATTAATACAGAGGAAATAATCAAGCTCTTTTTGATAAACTACTTTCTTTATGCTTGATTTTAAAGATACGGATAACAATACAGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU477984 True 221 lncRNA 0.35 1 60112635 60112855

Neighbor

gene id symbol gene type direction distance location
LOC110524202 NA coding upstream 143689 59930644 ~ 59968946 (+)
LOC110524200 LOC106613684 coding upstream 182092 59920588 ~ 59930543 (+)
LOC110524201 LOC106613685 coding upstream 192459 59915582 ~ 59920176 (+)
LOC110524198 LOC106613681 coding upstream 208601 59889619 ~ 59904034 (+)
LOC110524197 LOC106613680 coding upstream 232066 59869690 ~ 59880569 (+)
malt2 LOC106613687 coding downstream 20381 60133236 ~ 60161934 (+)
LOC110524208 LOC106613692 coding downstream 52753 60165608 ~ 60180274 (+)
LOC118964531 NA coding downstream 110942 60223797 ~ 60267847 (+)
LOC110524211 tpm4 coding downstream 255536 60368391 ~ 60395175 (+)
LOC110524213 LOC106613698 coding downstream 286135 60398990 ~ 60407448 (+)
G421811 NA non-coding upstream 2726 60109602 ~ 60109909 (+)
G421806 NA non-coding upstream 14640 60097763 ~ 60097995 (+)
G421799 NA non-coding upstream 23526 60088632 ~ 60089109 (+)
G421788 NA non-coding upstream 34262 60077890 ~ 60078373 (+)
G421748 NA non-coding upstream 102805 60009355 ~ 60009830 (+)
G421825 NA non-coding downstream 23548 60136403 ~ 60136615 (+)
G421826 NA non-coding downstream 24027 60136882 ~ 60137183 (+)
G421831 NA non-coding downstream 69768 60182623 ~ 60184805 (+)
G421840 NA non-coding downstream 74141 60186996 ~ 60187410 (+)
G420634 NA other upstream 1168418 58942728 ~ 58944217 (+)
G420117 LOC100846954 other upstream 1695859 58411240 ~ 58418268 (+)
G419452 NA other upstream 2212987 57884380 ~ 57899648 (+)
LOC110524119 LOC106613607 other upstream 2745298 57352343 ~ 57367627 (+)
LOC100135807 LOC106613594 other upstream 3154470 56943838 ~ 56958165 (+)
LOC110524226 LOC106573564 other downstream 581402 60694220 ~ 60695905 (+)
G423922 NA other downstream 1608682 61721537 ~ 61722024 (+)
G424079 NA other downstream 1992668 62105523 ~ 62105872 (+)
LOC110524265 LOC106613745 other downstream 2170297 62283054 ~ 62327772 (+)
G425224 NA other downstream 2932235 63045090 ~ 63051530 (+)

Expression


Co-expression Network