G421825


Basic Information

Item Value
gene id G421825
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 60136403 ~ 60136615 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU477997
agcatctagctggggtgaaagaggagcgattacaatagaggaaacaaAGTCTAGATCTAattttagcctgcagctttgatacagtggggcaaaaaaagtatttagtcagccaccaattgtgcaagttctcccacttaaaaagatgaggcctgcaattttcatcataggtacacttcaactatgacagacaaaattagaagaaaaaaaatacag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU477997 True 213 lncRNA 0.38 1 60136403 60136615

Neighbor

gene id symbol gene type direction distance location
LOC110524202 NA coding upstream 167457 59930644 ~ 59968946 (+)
LOC110524200 LOC106613684 coding upstream 205860 59920588 ~ 59930543 (+)
LOC110524201 LOC106613685 coding upstream 216227 59915582 ~ 59920176 (+)
LOC110524198 LOC106613681 coding upstream 232369 59889619 ~ 59904034 (+)
LOC110524197 LOC106613680 coding upstream 255834 59869690 ~ 59880569 (+)
LOC110524208 LOC106613692 coding downstream 28993 60165608 ~ 60180274 (+)
LOC118964531 NA coding downstream 87182 60223797 ~ 60267847 (+)
LOC110524211 tpm4 coding downstream 231776 60368391 ~ 60395175 (+)
LOC110524213 LOC106613698 coding downstream 262375 60398990 ~ 60407448 (+)
hsh2d LOC106613697 coding downstream 270938 60407553 ~ 60411038 (+)
G421814 NA non-coding upstream 23548 60112635 ~ 60112855 (+)
G421811 NA non-coding upstream 26494 60109602 ~ 60109909 (+)
G421806 NA non-coding upstream 38408 60097763 ~ 60097995 (+)
G421799 NA non-coding upstream 47294 60088632 ~ 60089109 (+)
G421788 NA non-coding upstream 58030 60077890 ~ 60078373 (+)
G421826 NA non-coding downstream 267 60136882 ~ 60137183 (+)
malt2 LOC106613687 non-coding downstream 3966 60133236 ~ 60161934 (+)
G421831 NA non-coding downstream 46008 60182623 ~ 60184805 (+)
G421840 NA non-coding downstream 50381 60186996 ~ 60187410 (+)
G421843 NA non-coding downstream 56741 60193356 ~ 60193756 (+)
G420634 NA other upstream 1192186 58942728 ~ 58944217 (+)
G420117 LOC100846954 other upstream 1719627 58411240 ~ 58418268 (+)
G419452 NA other upstream 2236755 57884380 ~ 57899648 (+)
LOC110524119 LOC106613607 other upstream 2769066 57352343 ~ 57367627 (+)
LOC100135807 LOC106613594 other upstream 3178238 56943838 ~ 56958165 (+)
LOC110524226 LOC106573564 other downstream 557642 60694220 ~ 60695905 (+)
G423922 NA other downstream 1584922 61721537 ~ 61722024 (+)
G424079 NA other downstream 1968908 62105523 ~ 62105872 (+)
LOC110524265 LOC106613745 other downstream 2146537 62283054 ~ 62327772 (+)
G425224 NA other downstream 2908475 63045090 ~ 63051530 (+)

Expression


Co-expression Network