G422500


Basic Information

Item Value
gene id G422500
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 60322657 ~ 60322919 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU478748
catgtatcactagccactttaactatgccactttgtttacatactcatctcatatgtatatactgtactcgataccatctactgtatcttgcctatgctgctctgtaccatcactcattcatatatcctaatgtacatattctttatccccttacactgtgtacaagacagtagttttggaattgttagttagattacttgttattactgcattgtcggaactagaagcacaagcatttcgctacactcgcattaacatctgc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU478748 True 263 lncRNA 0.37 1 60322657 60322919

Neighbor

gene id symbol gene type direction distance location
LOC118964531 NA coding upstream 54810 60223797 ~ 60267847 (+)
LOC110524208 LOC106613692 coding upstream 142383 60165608 ~ 60180274 (+)
malt2 LOC106613687 coding upstream 160723 60133236 ~ 60161934 (+)
LOC110524202 NA coding upstream 353711 59930644 ~ 59968946 (+)
LOC110524200 LOC106613684 coding upstream 392114 59920588 ~ 59930543 (+)
LOC110524211 tpm4 coding downstream 45472 60368391 ~ 60395175 (+)
LOC110524213 LOC106613698 coding downstream 76071 60398990 ~ 60407448 (+)
hsh2d LOC106613697 coding downstream 84634 60407553 ~ 60411038 (+)
LOC110524215 LOC106613700 coding downstream 104191 60427110 ~ 60432323 (+)
LOC110524216 LOC106613701 coding downstream 112844 60435763 ~ 60452642 (+)
G421867 NA non-coding upstream 24091 60297185 ~ 60298566 (+)
G421862 NA non-coding upstream 111902 60210506 ~ 60210755 (+)
G421861 NA non-coding upstream 112444 60209935 ~ 60210213 (+)
G421846 NA non-coding upstream 126310 60196059 ~ 60196347 (+)
G421844 LOC105030512 non-coding upstream 127873 60194223 ~ 60194784 (+)
G422514 NA non-coding downstream 8259 60331178 ~ 60418412 (+)
G422561 NA non-coding downstream 98512 60421431 ~ 60421644 (+)
G422562 NA non-coding downstream 99237 60422156 ~ 60422600 (+)
G422563 NA non-coding downstream 100631 60423550 ~ 60423839 (+)
G422566 NA non-coding downstream 110292 60433211 ~ 60433863 (+)
G420634 NA other upstream 1378440 58942728 ~ 58944217 (+)
G420117 LOC100846954 other upstream 1905881 58411240 ~ 58418268 (+)
G419452 NA other upstream 2423009 57884380 ~ 57899648 (+)
LOC110524119 LOC106613607 other upstream 2955320 57352343 ~ 57367627 (+)
LOC100135807 LOC106613594 other upstream 3364492 56943838 ~ 56958165 (+)
LOC110524226 LOC106573564 other downstream 371338 60694220 ~ 60695905 (+)
G423922 NA other downstream 1398618 61721537 ~ 61722024 (+)
G424079 NA other downstream 1782604 62105523 ~ 62105872 (+)
LOC110524265 LOC106613745 other downstream 1960233 62283054 ~ 62327772 (+)
G425224 NA other downstream 2722171 63045090 ~ 63051530 (+)

Expression


Co-expression Network