G423850


Basic Information

Item Value
gene id G423850
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 61597033 ~ 61597447 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU480207
ctttcgcaaggcactgtgtatatatatatatattagggcaaatattgcacaatccaggtgtacaaacAGCTTTTAGAGACtactcaagaagactcacagctgtaatcactgccaaatgtgcttcaaacATGTATTGACTAAGGGAGCAGAATACTTATGCTACGACTGTATTTTAGTTCATTTTTTACGATGAATTAAAATAAATCTTCCACTTTGATAGCATTTTGTGTAGATAggtgacaaaaaaatgacaattcattttaatcccactttgtaacacaaaatgttaaacaatccaaggggtctgaatacttttgcaaggcaataTTTAAGCGCCTTTCAACGGGGTATGGAGGTAGGTGCCACGCACACCtgtttgtatcaagaactgcaac

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU480207 True 395 lncRNA 0.36 2 61597033 61597447

Neighbor

gene id symbol gene type direction distance location
hapln4 hapln4 coding upstream 311367 61267215 ~ 61285666 (+)
tm6sf2 tm6s1 coding upstream 331827 61248572 ~ 61265206 (+)
LOC118964633 polr2e coding upstream 516026 61077504 ~ 61081007 (+)
LOC110524234 LOC106613716 coding upstream 654651 60939330 ~ 60942382 (+)
LOC110524227 fbn3 coding upstream 735662 60770756 ~ 60861371 (+)
LOC110524248 LOC106613729 coding downstream 39657 61637104 ~ 61655195 (+)
LOC110524251 LOC106613732 coding downstream 189000 61786447 ~ 61793643 (+)
gatad2ab NA coding downstream 211435 61808882 ~ 61840823 (+)
yjefn3 yjefn3 coding downstream 246569 61844016 ~ 62001312 (+)
cilp2 cilp2 coding downstream 408855 62006302 ~ 62030169 (+)
G423796 NA non-coding upstream 66918 61529901 ~ 61530115 (+)
G423600 NA non-coding upstream 124461 61406077 ~ 61472572 (+)
G423629 LOC106613725 non-coding upstream 153073 61443109 ~ 61443960 (+)
G423548 NA non-coding upstream 251966 61299640 ~ 61345067 (+)
G423541 NA non-coding upstream 306789 61289774 ~ 61290244 (+)
G423847 NA non-coding downstream 9220 61606667 ~ 61607436 (+)
G423856 NA non-coding downstream 15248 61612695 ~ 61612975 (+)
G423857 LOC106613727 non-coding downstream 21043 61618490 ~ 61619064 (+)
G423858 NA non-coding downstream 22388 61619835 ~ 61620135 (+)
G423859 NA non-coding downstream 23451 61620898 ~ 61621377 (+)
LOC110524226 LOC106573564 other upstream 901128 60694220 ~ 60695905 (+)
G420634 NA other upstream 2652816 58942728 ~ 58944217 (+)
G420117 LOC100846954 other upstream 3180257 58411240 ~ 58418268 (+)
G419452 NA other upstream 3697385 57884380 ~ 57899648 (+)
LOC110524119 LOC106613607 other upstream 4229696 57352343 ~ 57367627 (+)
G423922 NA other downstream 124090 61721537 ~ 61722024 (+)
G424079 NA other downstream 508076 62105523 ~ 62105872 (+)
LOC110524265 LOC106613745 other downstream 685705 62283054 ~ 62327772 (+)
G425224 NA other downstream 1447643 63045090 ~ 63051530 (+)
nfil3-4 LOC106614010 other downstream 2078967 63676409 ~ 63684848 (+)

Expression


Co-expression Network