G423926


Basic Information

Item Value
gene id G423926
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 61732871 ~ 61733382 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU480291
ATTAAAATGGAGTGCTCTATGTGTGATTAAACTGGTGGCTTGGCTGGCAGAGGCCAAGCTCAAGTACAGGCCTGCGATTTGGACCATAATGAAAATGTGAGGGGCTGAGGCGGTGTTCTCAACcccgcaacacaacacacactgatcagcaccaaacatacacacaccacagagctTAACACACACCGATCAGCACCAAGCATACACACACCACAGCTTAACACACGCAGATCAGCACCAAACACACCTTACAGCCCAACACACGCAGATCAGCACCAAACACACCTTACAGCCCAACACACGCAGATCAGCACCAAACACACCTTACAGCCCAACACGTTGCTTAACCATTTACTGCAGTGGGTTAAATCAGGGTCATACACAGTGTTTCTCGGTAGTCTTCAACCAATctgctttgaaacaaaagtatacacctcacacacatggttacgTTCTTAAaagaaagaagaca

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU480291 True 472 lncRNA 0.47 2 61732871 61733382

Neighbor

gene id symbol gene type direction distance location
LOC110524248 LOC106613729 coding upstream 77676 61637104 ~ 61655195 (+)
nr2c2ap nr2c2ap coding upstream 133539 61590603 ~ 61599332 (+)
hapln4 hapln4 coding upstream 447205 61267215 ~ 61285666 (+)
tm6sf2 tm6s1 coding upstream 467665 61248572 ~ 61265206 (+)
LOC118964633 polr2e coding upstream 651864 61077504 ~ 61081007 (+)
LOC110524251 LOC106613732 coding downstream 53065 61786447 ~ 61793643 (+)
gatad2ab NA coding downstream 75500 61808882 ~ 61840823 (+)
yjefn3 yjefn3 coding downstream 110634 61844016 ~ 62001312 (+)
cilp2 cilp2 coding downstream 272920 62006302 ~ 62030169 (+)
si:ch211-212d10.1 LOC106614002 coding downstream 334816 62068198 ~ 62072769 (+)
G423906 NA non-coding upstream 47245 61685412 ~ 61685626 (+)
G423901 NA non-coding upstream 53018 61679621 ~ 61679853 (+)
G423874 NA non-coding upstream 76481 61655986 ~ 61656390 (+)
G423881 NA non-coding upstream 87890 61644672 ~ 61644981 (+)
G423875 NA non-coding upstream 94329 61638322 ~ 61638542 (+)
G423945 LOC106613733 non-coding downstream 29944 61763326 ~ 61765950 (+)
G424016 NA non-coding downstream 153171 61886553 ~ 61960274 (+)
G424017 NA non-coding downstream 153588 61886970 ~ 61929755 (+)
G424018 NA non-coding downstream 153917 61887299 ~ 61954426 (+)
G424019 NA non-coding downstream 162046 61895428 ~ 61936387 (+)
G423922 NA other upstream 10847 61721537 ~ 61722024 (+)
LOC110524226 LOC106573564 other upstream 1036966 60694220 ~ 60695905 (+)
G420634 NA other upstream 2788654 58942728 ~ 58944217 (+)
G420117 LOC100846954 other upstream 3316095 58411240 ~ 58418268 (+)
G419452 NA other upstream 3833223 57884380 ~ 57899648 (+)
G424079 NA other downstream 372141 62105523 ~ 62105872 (+)
LOC110524265 LOC106613745 other downstream 549770 62283054 ~ 62327772 (+)
G425224 NA other downstream 1311708 63045090 ~ 63051530 (+)
nfil3-4 LOC106614010 other downstream 1943032 63676409 ~ 63684848 (+)
sac3d1 sac3d1 other downstream 2443646 64177028 ~ 64183138 (+)

Expression


Co-expression Network