Gene
RNA
| Item | Value |
|---|---|
| gene id | G424077 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 62102196 ~ 62102397 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| fish virus induced TRIM protein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU480456 | True | 202 | lncRNA | 0.52 | 1 | 62102196 | 62102397 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:ch211-212d10.1 | LOC106614002 | coding | upstream | 29427 | 62068198 ~ 62072769 (+) |
| cilp2 | cilp2 | coding | upstream | 72027 | 62006302 ~ 62030169 (+) |
| yjefn3 | yjefn3 | coding | upstream | 100884 | 61844016 ~ 62001312 (+) |
| gatad2ab | NA | coding | upstream | 261373 | 61808882 ~ 61840823 (+) |
| LOC110524251 | LOC106613732 | coding | upstream | 308553 | 61786447 ~ 61793643 (+) |
| LOC110524265 | LOC106613745 | coding | downstream | 180657 | 62283054 ~ 62327772 (+) |
| LOC100301654 | LOC106613747 | coding | downstream | 342278 | 62444675 ~ 62449760 (+) |
| LOC110524267 | LOC106613748 | coding | downstream | 365866 | 62468263 ~ 62474145 (+) |
| bsg | bsg | coding | downstream | 374477 | 62476874 ~ 62490792 (+) |
| LOC110524269 | bsg | coding | downstream | 377388 | 62479785 ~ 62485347 (+) |
| G424041 | NA | non-coding | upstream | 11197 | 62086822 ~ 62090999 (+) |
| G424061 | NA | non-coding | upstream | 54904 | 62047025 ~ 62047292 (+) |
| G424031 | NA | non-coding | upstream | 80282 | 61983391 ~ 62021914 (+) |
| G424018 | NA | non-coding | upstream | 147770 | 61887299 ~ 61954426 (+) |
| G424080 | NA | non-coding | downstream | 5207 | 62107604 ~ 62107883 (+) |
| G424081 | NA | non-coding | downstream | 6162 | 62108559 ~ 62108771 (+) |
| G424090 | NA | non-coding | downstream | 21854 | 62124251 ~ 62124608 (+) |
| G424130 | NA | non-coding | downstream | 73625 | 62176022 ~ 62176308 (+) |
| G424169 | NA | non-coding | downstream | 136825 | 62239222 ~ 62239422 (+) |
| G423922 | NA | other | upstream | 380172 | 61721537 ~ 61722024 (+) |
| LOC110524226 | LOC106573564 | other | upstream | 1406291 | 60694220 ~ 60695905 (+) |
| G420634 | NA | other | upstream | 3157979 | 58942728 ~ 58944217 (+) |
| G420117 | LOC100846954 | other | upstream | 3685420 | 58411240 ~ 58418268 (+) |
| G419452 | NA | other | upstream | 4202548 | 57884380 ~ 57899648 (+) |
| G424079 | NA | other | downstream | 3126 | 62105523 ~ 62105872 (+) |
| G425224 | NA | other | downstream | 942693 | 63045090 ~ 63051530 (+) |
| nfil3-4 | LOC106614010 | other | downstream | 1574017 | 63676409 ~ 63684848 (+) |
| sac3d1 | sac3d1 | other | downstream | 2074631 | 64177028 ~ 64183138 (+) |
