G424080


Basic Information

Item Value
gene id G424080
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 62107604 ~ 62107883 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU480459
gattcaaccacaatgactagggaggttttccaatgcctcacaaagaagggcacctactggtagatgggtaaaaatgaaaaagtctgacattgaatatccctttgagcatggggaTGTAATTAATTACCCTTTGGACggcgtatcaatacacccagtcactacaaagatacaggcgtccttcctaactctgttgccggagaggaaggaaaccgctcagggatttcaccatgaaacCAATTCTAACTATAAAactgttacagagtttaatggctgtgatagg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU480459 True 280 lncRNA 0.43 1 62107604 62107883

Neighbor

gene id symbol gene type direction distance location
si:ch211-212d10.1 LOC106614002 coding upstream 34835 62068198 ~ 62072769 (+)
cilp2 cilp2 coding upstream 77435 62006302 ~ 62030169 (+)
yjefn3 yjefn3 coding upstream 106292 61844016 ~ 62001312 (+)
gatad2ab NA coding upstream 266781 61808882 ~ 61840823 (+)
LOC110524251 LOC106613732 coding upstream 313961 61786447 ~ 61793643 (+)
LOC110524265 LOC106613745 coding downstream 175171 62283054 ~ 62327772 (+)
LOC100301654 LOC106613747 coding downstream 336792 62444675 ~ 62449760 (+)
LOC110524267 LOC106613748 coding downstream 360380 62468263 ~ 62474145 (+)
bsg bsg coding downstream 368991 62476874 ~ 62490792 (+)
LOC110524269 bsg coding downstream 371902 62479785 ~ 62485347 (+)
G424077 NA non-coding upstream 5207 62102196 ~ 62102397 (+)
G424041 NA non-coding upstream 16605 62086822 ~ 62090999 (+)
G424061 NA non-coding upstream 60312 62047025 ~ 62047292 (+)
G424031 NA non-coding upstream 85690 61983391 ~ 62021914 (+)
G424025 NA non-coding upstream 163375 61938553 ~ 61944229 (+)
G424081 NA non-coding downstream 676 62108559 ~ 62108771 (+)
G424090 NA non-coding downstream 16368 62124251 ~ 62124608 (+)
G424130 NA non-coding downstream 68139 62176022 ~ 62176308 (+)
G424169 NA non-coding downstream 131339 62239222 ~ 62239422 (+)
G424170 NA non-coding downstream 132056 62239939 ~ 62240633 (+)
G424079 NA other upstream 1732 62105523 ~ 62105872 (+)
G423922 NA other upstream 385580 61721537 ~ 61722024 (+)
LOC110524226 LOC106573564 other upstream 1411699 60694220 ~ 60695905 (+)
G420634 NA other upstream 3163387 58942728 ~ 58944217 (+)
G420117 LOC100846954 other upstream 3690828 58411240 ~ 58418268 (+)
G425224 NA other downstream 937207 63045090 ~ 63051530 (+)
nfil3-4 LOC106614010 other downstream 1568531 63676409 ~ 63684848 (+)
sac3d1 sac3d1 other downstream 2069145 64177028 ~ 64183138 (+)
LOC110522985 NA other downstream 2135719 64243153 ~ 64244790 (+)

Expression


Co-expression Network