G424090


Basic Information

Item Value
gene id G424090
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 62124251 ~ 62124608 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU480469
agacaggtgtgtgcggTATGATACGAGGAGGAAATATGTGATCAtgtttagaggtcgaccgattaatcggaatggctgattaattagggccgatttcacgTTTTCGttacaatcggaaatcggtatttttgggcgccgatttcagATTATTACATTTTACAAATTTAACTTGAAAAAAAATATctactttttatttaactaggcaagtcagttaagaacacattcttattttcaatgacggcctaggaactgtgggttaactgccttgttcaggggcagaacaacagattttcaccttgtcagctcaggggtttccAATATAGTGCTATTTAATGCACACACGGTGAACAACGGCCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU480469 True 358 lncRNA 0.40 1 62124251 62124608

Neighbor

gene id symbol gene type direction distance location
si:ch211-212d10.1 LOC106614002 coding upstream 51482 62068198 ~ 62072769 (+)
cilp2 cilp2 coding upstream 94082 62006302 ~ 62030169 (+)
yjefn3 yjefn3 coding upstream 122939 61844016 ~ 62001312 (+)
gatad2ab NA coding upstream 283428 61808882 ~ 61840823 (+)
LOC110524251 LOC106613732 coding upstream 330608 61786447 ~ 61793643 (+)
LOC110524265 LOC106613745 coding downstream 158446 62283054 ~ 62327772 (+)
LOC100301654 LOC106613747 coding downstream 320067 62444675 ~ 62449760 (+)
LOC110524267 LOC106613748 coding downstream 343655 62468263 ~ 62474145 (+)
bsg bsg coding downstream 352266 62476874 ~ 62490792 (+)
LOC110524269 bsg coding downstream 355177 62479785 ~ 62485347 (+)
G424081 NA non-coding upstream 15480 62108559 ~ 62108771 (+)
G424080 NA non-coding upstream 16368 62107604 ~ 62107883 (+)
G424077 NA non-coding upstream 21854 62102196 ~ 62102397 (+)
G424041 NA non-coding upstream 33252 62086822 ~ 62090999 (+)
G424061 NA non-coding upstream 76959 62047025 ~ 62047292 (+)
G424130 NA non-coding downstream 51414 62176022 ~ 62176308 (+)
G424169 NA non-coding downstream 114614 62239222 ~ 62239422 (+)
G424170 NA non-coding downstream 115331 62239939 ~ 62240633 (+)
G424171 NA non-coding downstream 117359 62241967 ~ 62242394 (+)
G424172 NA non-coding downstream 118794 62243402 ~ 62243604 (+)
G424079 NA other upstream 18379 62105523 ~ 62105872 (+)
G423922 NA other upstream 402227 61721537 ~ 61722024 (+)
LOC110524226 LOC106573564 other upstream 1428346 60694220 ~ 60695905 (+)
G420634 NA other upstream 3180034 58942728 ~ 58944217 (+)
G420117 LOC100846954 other upstream 3707475 58411240 ~ 58418268 (+)
G425224 NA other downstream 920482 63045090 ~ 63051530 (+)
nfil3-4 LOC106614010 other downstream 1551806 63676409 ~ 63684848 (+)
sac3d1 sac3d1 other downstream 2052420 64177028 ~ 64183138 (+)
LOC110522985 NA other downstream 2118994 64243153 ~ 64244790 (+)

Expression


Co-expression Network