G424172


Basic Information

Item Value
gene id G424172
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 62243402 ~ 62243604 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU480559
ACCTAAACCTATCTctggcagacagagggagaaaaccagcccagtcttGATGGACTGTCAGGAGGTGGTGGCTTAATGCAGATTAGATGTCAGGAGAAAATTTGCCTGGGAAAGCCAAGAAGACGAATTAAGAGAGCCAGTGCCCTTGATAGAGGCCAGCCTATTCTGTCACTGTCTGAATATAGCAGGAGCCTACTGGAACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU480559 True 203 lncRNA 0.49 1 62243402 62243604

Neighbor

gene id symbol gene type direction distance location
si:ch211-212d10.1 LOC106614002 coding upstream 170633 62068198 ~ 62072769 (+)
cilp2 cilp2 coding upstream 213233 62006302 ~ 62030169 (+)
yjefn3 yjefn3 coding upstream 242090 61844016 ~ 62001312 (+)
gatad2ab NA coding upstream 402579 61808882 ~ 61840823 (+)
LOC110524251 LOC106613732 coding upstream 449759 61786447 ~ 61793643 (+)
LOC110524265 LOC106613745 coding downstream 39450 62283054 ~ 62327772 (+)
LOC100301654 LOC106613747 coding downstream 201071 62444675 ~ 62449760 (+)
LOC110524267 LOC106613748 coding downstream 224659 62468263 ~ 62474145 (+)
bsg bsg coding downstream 233270 62476874 ~ 62490792 (+)
LOC110524269 bsg coding downstream 236181 62479785 ~ 62485347 (+)
G424171 NA non-coding upstream 1008 62241967 ~ 62242394 (+)
G424170 NA non-coding upstream 2769 62239939 ~ 62240633 (+)
G424169 NA non-coding upstream 3980 62239222 ~ 62239422 (+)
G424130 NA non-coding upstream 67094 62176022 ~ 62176308 (+)
G424090 NA non-coding upstream 118794 62124251 ~ 62124608 (+)
G424173 NA non-coding downstream 151 62243755 ~ 62243969 (+)
G424174 NA non-coding downstream 841 62244445 ~ 62244660 (+)
G424175 NA non-coding downstream 1188 62244792 ~ 62245361 (+)
G424176 NA non-coding downstream 1885 62245489 ~ 62245689 (+)
G424178 NA non-coding downstream 3034 62246638 ~ 62246914 (+)
G424079 NA other upstream 137530 62105523 ~ 62105872 (+)
G423922 NA other upstream 521378 61721537 ~ 61722024 (+)
LOC110524226 LOC106573564 other upstream 1547497 60694220 ~ 60695905 (+)
G420634 NA other upstream 3299185 58942728 ~ 58944217 (+)
G420117 LOC100846954 other upstream 3826626 58411240 ~ 58418268 (+)
G425224 NA other downstream 801486 63045090 ~ 63051530 (+)
nfil3-4 LOC106614010 other downstream 1432810 63676409 ~ 63684848 (+)
sac3d1 sac3d1 other downstream 1933424 64177028 ~ 64183138 (+)
LOC110522985 NA other downstream 1999998 64243153 ~ 64244790 (+)

Expression


Co-expression Network