LOC118964804


Basic Information

Item Value
gene id LOC118964804
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 555164 ~ 555893 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005051981.1
gggggggtggtagagAGGGTATATTTTTATTCGGCGTCCCGGCAAAAGAAATACCAGTAATCCatcaatcattttttttttataattaaaAAACGTTGGCTATAACAGCATTATTTCTCATTACCACGTCAGAGGAGAAGAAATGGCTTTGGAAACAGGTGATTTAGTCTACTTGGAAATGGGTGATATAGCCTACTTGGAAATGGGTGATATAGTCTACTTGGAAATGGGTGATATAGCCTACTTGGAAATGGGTGATATAGTCTACTTGGAAATGGGTGATATAGTCTACTTGGAAATGGGTGATATAGTCTACTTGGAAGCATGTGATATAGCCTACTTGGAAACAGGTGATATAGTCTACTTGAAAGCATGTGATATAGCCTACATTCCAAAATGCGTTGTGTTTCCAATGGAGAAAACAGGCATTTTGCCACGGCAGAGATGAGTGACCGAGACGCACGCGGACAGCAGCGGACGAGGACATTCTGGCCCAAACACTTTGGGGTGTTTTGGGTTACATATTTCTTTCCATTCACTCCTGTTCGGATGCTGGAAATATGTCTCAAGTGGATGAACGTGTGAGGGTCGCCTCGTAAAGGGTCCTTTTGAAGTAGTTATTTGACAATTgggtgaaaacatcatgactggttatGTTTATGCCACAATAAAAGTTAAATGACAAATCTTTA

Function

NR:

description
keratin-associated protein 6-2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005051981.1 True 692 mRNA 0.41 2 555164 555893

Neighbor

gene id symbol gene type direction distance location
LOC110525134 NA coding upstream 910 551781 ~ 554254 (+)
LOC110525138 rufy3 coding upstream 5265 442716 ~ 549899 (+)
LOC118964801 NA coding upstream 9460 543104 ~ 545704 (+)
LOC118964800 LOC105008036 coding upstream 479300 56073 ~ 77877 (+)
LOC118964799 isca1 coding upstream 506163 43896 ~ 52580 (+)
tars1 LOC106585996 coding downstream 8384 564277 ~ 602519 (+)
slc4a4a LOC101484802 coding downstream 219771 775664 ~ 1118589 (+)
LOC118964805 NA coding downstream 441136 997029 ~ 1002288 (+)
LOC110525062 LOC106570947 coding downstream 1446195 2002088 ~ 2105141 (+)
LOC110525063 LOC106570939 coding downstream 1593347 2149240 ~ 2199894 (+)
G464120 NA non-coding upstream 20771 533938 ~ 534393 (+)
G464092 NA non-coding upstream 100074 454317 ~ 455090 (+)
G463893 NA non-coding upstream 116242 438576 ~ 438922 (+)
G463894 NA non-coding upstream 116843 437649 ~ 438321 (+)
G463892 NA non-coding upstream 118001 436884 ~ 437163 (+)
G464067 NA non-coding downstream 11757 567650 ~ 570254 (+)
G464126 NA non-coding downstream 37434 593327 ~ 599273 (+)
G464132 NA non-coding downstream 50504 606397 ~ 608103 (+)
G464138 NA non-coding downstream 59227 615120 ~ 615541 (+)
G464154 NA non-coding downstream 86995 642888 ~ 643281 (+)
G463813 NA other upstream 287013 265409 ~ 268151 (+)
G464705 NA other downstream 672812 1228705 ~ 1229099 (+)
G465203 NA other downstream 1506435 2062328 ~ 2064067 (+)
zfr zfr other downstream 1843868 2342330 ~ 2451362 (+)
G465355 NA other downstream 1849226 2405119 ~ 2406090 (+)
LOC110525071 LOC106585963 other downstream 2249490 2743964 ~ 2866482 (+)

Expression


Co-expression Network