LOC110526902


Basic Information

Item Value
gene id LOC110526902
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 45872819 ~ 45873709 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110526902
ATGGCGGATGGGGACAATGGGAGTGAGGGCGGTGGTGGCGGGTTTCAGCACTACTAGCGGGATCAGGAGACCCAAGAGCTATCCTTGAAGCGGCTGGACATCCAGAACAAATGATTCTACCTGGATGTAAAGCAGAATGCGAAGGGCAGGTTTATCAAAATCGCAGAGGGGGGCTCGAAAAGTCGACCGACCCTTTCCATGTCAATCGCCGCGGAGTTCCGTGACTACCTGGGGGATTTCATAGATCATTACACCCAACTTGGGCCTAGAAGCCCCGAGCAATTCGCTCAGTCATCCGGCGGTGGATGACAGTGAGCCTTTAAGAGTCCGTTCCTGGTTCGAGAGAACAGAAAATACTACCCCGATCTGAAAGAGAaccaaagggggagggggggttctcCGGATCAGGCAGACCATCAACCGAGGACCTGGGTTCAGAGTAGGAGGTGGCGGAGTCCCCGGTGGCATGAAATACAGACAAATCATCACCCTCCCGACAAGGGTTTAATAGACTTCCATGACGCGCTTGCCAAGCATATAGACAATGACGAGGAACTCGCCTATGGTGAAGGAGCAGGGGACTACAGCGAGCTTCCGGAGGGCACCTCTATCATGGTGGACTCCAAACGGTTCTTCTTCGACGTGGGATTCAACAAATACTGAGTTTTTTGGAGGGTGAGCGAAGTCAAACCCAGCAGTAGAAACTCTATCACTATCCCGTTCAAAGCTTGGGGCAAGTTTGGAGGAGCGTTCTCCCGTTATGCCAAAGATATTAAAGACATAcagcagagacagagggataAAATGTTTGAAAAGAGaccaggaggagcaggagaaaagTCAGAGGTAGACCATGCAGATGCCGGCTGTGCAGTCAAGCTGTTAACGTGA

Function

NR:

description
transcriptional activator protein Pur-beta-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110526902 True 891 mRNA 0.52 1 45872819 45873709

Neighbor

gene id symbol gene type direction distance location
LOC110526036 LOC106584896 coding upstream 35080 45813398 ~ 45837739 (+)
si:dkey-174n20.1 LOC106584900 coding upstream 218752 45647734 ~ 45654067 (+)
LOC110526028 ccdc60 coding upstream 635875 45187119 ~ 45236944 (+)
LOC110526027 hspb8 coding upstream 693994 45155981 ~ 45178825 (+)
LOC110526025 srrm4 coding upstream 719834 45061658 ~ 45152985 (+)
LOC118964875 NA coding downstream 26210 45899919 ~ 45901120 (+)
LOC110525032 NA coding downstream 84721 45958430 ~ 45959299 (+)
LOC110526904 NA coding downstream 94755 45968464 ~ 45972013 (+)
LOC110526042 LOC106584891 coding downstream 202375 46076084 ~ 46190292 (+)
LOC110526905 LOC106584888 coding downstream 325810 46199519 ~ 46263098 (+)
G513033 NA non-coding upstream 9636 45851233 ~ 45863183 (+)
G513030 NA non-coding upstream 64580 45808015 ~ 45808239 (+)
G513024 NA non-coding upstream 75011 45797501 ~ 45797808 (+)
G513021 NA non-coding upstream 79034 45790666 ~ 45793785 (+)
G512988 NA non-coding upstream 127662 45744949 ~ 45745157 (+)
G513043 LOC100136024 non-coding downstream 30384 45904093 ~ 45906563 (+)
G513363 NA non-coding downstream 259489 46133198 ~ 46141623 (+)
G513377 NA non-coding downstream 319719 46193428 ~ 46193656 (+)
G513379 NA non-coding downstream 321529 46195238 ~ 46195439 (+)
G512912 NA other upstream 236569 45635589 ~ 45636250 (+)
G512192 LOC106584908 other upstream 686950 45184439 ~ 45185869 (+)
G510416 NA other upstream 2214326 43657468 ~ 43658493 (+)
G509160 NA other upstream 3302650 42567105 ~ 42570169 (+)
G513501 NA other downstream 486247 46359956 ~ 46360585 (+)
G513745 NA other downstream 1026852 46900561 ~ 46901123 (+)
G514464 NA other downstream 1053133 46926842 ~ 46927714 (+)
G514499 NA other downstream 1148585 47022294 ~ 47023092 (+)

Expression


Co-expression Network