LOC118964875


Basic Information

Item Value
gene id LOC118964875
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 45899919 ~ 45901120 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005052121.1
ggtccgatctttaCTCCTCCtgagacgaagaggaggaaatccgttacaaacacacaagtcatgatttctgccGCACTCAAAACAACTTAACTCTGGGAAATCTGAcatcagtgagttcaagacaactgggaactcaggaaaaaacgagctccaactgggaaaatacgttttgaatggtTATCCAACAACGGAATTagttcccagttgtattgaaagcaccataaatccagaaaatgccagactttgatggc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005052121.1 True 251 mRNA 0.43 3 45899919 45901120

Neighbor

gene id symbol gene type direction distance location
LOC110526902 NA coding upstream 26210 45872819 ~ 45873709 (+)
LOC110526036 LOC106584896 coding upstream 62180 45813398 ~ 45837739 (+)
si:dkey-174n20.1 LOC106584900 coding upstream 245852 45647734 ~ 45654067 (+)
LOC110526028 ccdc60 coding upstream 662975 45187119 ~ 45236944 (+)
LOC110526027 hspb8 coding upstream 721094 45155981 ~ 45178825 (+)
LOC110525032 NA coding downstream 57310 45958430 ~ 45959299 (+)
LOC110526904 NA coding downstream 67344 45968464 ~ 45972013 (+)
LOC110526042 LOC106584891 coding downstream 174964 46076084 ~ 46190292 (+)
LOC110526905 LOC106584888 coding downstream 298399 46199519 ~ 46263098 (+)
ascc2 ascc2 coding downstream 544836 46445956 ~ 46461957 (+)
G513033 NA non-coding upstream 36736 45851233 ~ 45863183 (+)
G513030 NA non-coding upstream 91680 45808015 ~ 45808239 (+)
G513024 NA non-coding upstream 102111 45797501 ~ 45797808 (+)
G513021 NA non-coding upstream 106134 45790666 ~ 45793785 (+)
G512988 NA non-coding upstream 154762 45744949 ~ 45745157 (+)
G513043 LOC100136024 non-coding downstream 2973 45904093 ~ 45906563 (+)
G513363 NA non-coding downstream 232078 46133198 ~ 46141623 (+)
G513377 NA non-coding downstream 292308 46193428 ~ 46193656 (+)
G513379 NA non-coding downstream 294118 46195238 ~ 46195439 (+)
G512912 NA other upstream 263669 45635589 ~ 45636250 (+)
G512192 LOC106584908 other upstream 714050 45184439 ~ 45185869 (+)
G510416 NA other upstream 2241426 43657468 ~ 43658493 (+)
G509160 NA other upstream 3329750 42567105 ~ 42570169 (+)
G513501 NA other downstream 458836 46359956 ~ 46360585 (+)
G513745 NA other downstream 999441 46900561 ~ 46901123 (+)
G514464 NA other downstream 1025722 46926842 ~ 46927714 (+)
G514499 NA other downstream 1121174 47022294 ~ 47023092 (+)

Expression


Co-expression Network