G463829


Basic Information

Item Value
gene id G463829
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 290666 ~ 291834 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU526517
gtttattttctcttttgtactttaataactatttgcacatcaccacaacacataatatgacatttgaaaattCATTCTTCTTTTGGAACTCTTTAGTGTAATggttactgttaatttttattgttcatttcactttggtttacaatctatttcacttgctttggcaatgttaacatatgtttcccatgccaataaagccctttgaattcaATTGAGAAGGCGTGGATAGAGaaagggttgggggggggggacagggagcAAACCTCAAAACATTTTCTACTATTTGTCTCCCCCTAGTGGATATATTTGGGAAAGCAAGAGAAGCAATATTCAGATGGGTAAGTTCCCCTTTATTAAAGCGCTTCCAAAgccagtgacatggccatactggAACAGAGCCTCACTTAGCCATTTAATTACAGCTGAACACATTGAGAACCATCTACAGCAGCCTGACAAGTCATTAATAGGACAGAGAGAAGTATGAACATACAGATAATAGTTATTAATCACACGGGACAGCATTAGTCCAACAGTTATACGCATTCAAACTGCCTTTCACCCATTTCTTCAACTGCTGTCTAAACAGACACAAAGGTCCCTTAATAAGCACTAGATGGGTGCTGCGTTCAAACACACACCGCTGTGGAACGCTCCGGGCTACAGGTCTGGAATCAGCCTCCCCAAACATAACATTAACCATTCGTGGGGAAACTGCCAAATCCAAGATCGGCATCTAGGGGGCGACATCCTCCTCGTCCTTGTGGAAGATCCAGATAAAATAGATGGTACTGAAAAGGCATGCCTCTCGTTGTATTTCTATCTGTTGTCGATGAGAGAGCAGCTGTTAGTCATCTTATTATGACGATCACAAACTGGGAGAAAATCAAGAGACCTACGGCGTCATCGTCTCTAGTCAGTTCTCCTTGGCACTTTCCTTAGGTTAGACTGTTAGGTCTGCATGCCCTGTCAGACCATATACACCccggaggctggtgaggggaggagagctCATTATAAATGAATGAAacggaaaccatgtgtttgatccATTTATTCagctcctcccctcagcagcctcctgtgcaaCACATGACAGTTTTGTAGGAAAAATCCTCTCACATTGCCTATAGATTCTCTCTGATCTGAGACAGTCTGCGAGACAGCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU526517 True 1169 lncRNA 0.43 1 290666 291834

Neighbor

gene id symbol gene type direction distance location
LOC118964800 LOC105008036 coding upstream 214802 56073 ~ 77877 (+)
LOC118964799 isca1 coding upstream 241665 43896 ~ 52580 (+)
LOC110525138 rufy3 coding downstream 150882 442716 ~ 549899 (+)
LOC118964801 NA coding downstream 251270 543104 ~ 545704 (+)
LOC110525134 NA coding downstream 259947 551781 ~ 554254 (+)
LOC118964804 NA coding downstream 263330 555164 ~ 555893 (+)
tars1 LOC106585996 coding downstream 272443 564277 ~ 602519 (+)
G463828 NA non-coding upstream 1405 288933 ~ 289261 (+)
G463823 NA non-coding upstream 10764 279286 ~ 279902 (+)
G463822 NA non-coding upstream 11689 278364 ~ 278977 (+)
G463805 NA non-coding upstream 38407 251401 ~ 252259 (+)
G463798 NA non-coding upstream 46695 243721 ~ 243971 (+)
G463849 stambp non-coding downstream 23496 315330 ~ 316561 (+)
G463850 NA non-coding downstream 30925 322759 ~ 328447 (+)
G463861 NA non-coding downstream 47364 339198 ~ 340053 (+)
G463835 NA non-coding downstream 49940 341774 ~ 348548 (+)
G463863 NA non-coding downstream 63159 354993 ~ 355575 (+)
G463813 NA other upstream 22515 265409 ~ 268151 (+)
G464705 NA other downstream 936871 1228705 ~ 1229099 (+)
G465203 NA other downstream 1770494 2062328 ~ 2064067 (+)
zfr zfr other downstream 2107927 2342330 ~ 2451362 (+)
G465355 NA other downstream 2113285 2405119 ~ 2406090 (+)

Expression


Co-expression Network