G464772


Basic Information

Item Value
gene id G464772
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 1312340 ~ 1312555 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU527730
GGCATAGTAAGACAGCAGGTCCATTTTCTGGCATAGTAAGACAGCAGGTCCATTTTCTGGCATAGTAAGACAGCAGGTCCTTTTTCTGGCATAGTAAGACAGCAGCTCCATTTTCTGGCATAGTAAGACAGCAGGTCCATTTTCTGGCATAGTTAGACAGCAGGTCCATTTTCTGGCATAGTAAGAAAGCAGGTCCATTTTCTGGCATAGTAAGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU527730 True 216 lncRNA 0.44 1 1312340 1312555

Neighbor

gene id symbol gene type direction distance location
slc4a4a LOC101484802 coding upstream 193751 775664 ~ 1118589 (+)
LOC118964805 NA coding upstream 310052 997029 ~ 1002288 (+)
tars1 LOC106585996 coding upstream 709821 564277 ~ 602519 (+)
LOC118964804 NA coding upstream 756447 555164 ~ 555893 (+)
LOC110525134 NA coding upstream 758086 551781 ~ 554254 (+)
LOC110525062 LOC106570947 coding downstream 689533 2002088 ~ 2105141 (+)
LOC110525063 LOC106570939 coding downstream 836685 2149240 ~ 2199894 (+)
zfr zfr coding downstream 1046067 2342330 ~ 2451362 (+)
mtmr12 mtmr12 coding downstream 1097676 2410231 ~ 2446470 (+)
LOC110525158 LOC106570936 coding downstream 1153919 2466474 ~ 2489239 (+)
G464739 NA non-coding upstream 34297 1277684 ~ 1278043 (+)
G464715 NA non-coding upstream 64214 1247895 ~ 1248126 (+)
G464702 NA non-coding upstream 85509 1226366 ~ 1226831 (+)
G464699 NA non-coding upstream 111122 1200899 ~ 1201218 (+)
G464368 NA non-coding upstream 131525 1180200 ~ 1180815 (+)
G464773 NA non-coding downstream 647 1313202 ~ 1313430 (+)
G464775 NA non-coding downstream 5276 1317831 ~ 1318070 (+)
G464794 LOC106585999 non-coding downstream 33641 1346196 ~ 1348337 (+)
G464795 NA non-coding downstream 36301 1348856 ~ 1354485 (+)
G464815 NA non-coding downstream 75274 1387829 ~ 1392798 (+)
G464705 NA other upstream 83241 1228705 ~ 1229099 (+)
LOC110525138 rufy3 other upstream 853334 442716 ~ 549899 (+)
G463813 NA other upstream 1044189 265409 ~ 268151 (+)
LOC118964799 isca1 other upstream 1259850 43896 ~ 52580 (+)
G465203 NA other downstream 749773 2062328 ~ 2064067 (+)
G465355 NA other downstream 1092564 2405119 ~ 2406090 (+)
LOC110525071 LOC106585963 other downstream 1492828 2743964 ~ 2866482 (+)
G465578 NA other downstream 1666287 2978842 ~ 2982425 (+)

Expression


Co-expression Network