G464902


Basic Information

Item Value
gene id G464902
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 1422588 ~ 1423475 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU527901
ggatattaaacctcctccatgtatatctcactaggtaaggatattaaacctccatgtatatctcactaggtcaggatattaaacctcctccatgtatatctcactaggtaaggatattaaacctccatgtatatctcactaggtaaggatattaaacctccatgtatatctcactaggtcaggatattaaacctcctccatgtatatctccctaggtcaggatattaaacctccatgtagatctcactaggtcagggtattaaacctccatgtatatctcactaggtcaggatattaaacctcctcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU527901 True 307 lncRNA 0.38 2 1422588 1423475

Neighbor

gene id symbol gene type direction distance location
slc4a4a LOC101484802 coding upstream 303999 775664 ~ 1118589 (+)
LOC118964805 NA coding upstream 420300 997029 ~ 1002288 (+)
tars1 LOC106585996 coding upstream 820069 564277 ~ 602519 (+)
LOC118964804 NA coding upstream 866695 555164 ~ 555893 (+)
LOC110525134 NA coding upstream 868334 551781 ~ 554254 (+)
LOC110525062 LOC106570947 coding downstream 578613 2002088 ~ 2105141 (+)
LOC110525063 LOC106570939 coding downstream 725765 2149240 ~ 2199894 (+)
zfr zfr coding downstream 935147 2342330 ~ 2451362 (+)
mtmr12 mtmr12 coding downstream 986756 2410231 ~ 2446470 (+)
LOC110525158 LOC106570936 coding downstream 1042999 2466474 ~ 2489239 (+)
G464876 NA non-coding upstream 12662 1409381 ~ 1409926 (+)
G464875 NA non-coding upstream 13333 1408975 ~ 1409255 (+)
G464871 NA non-coding upstream 17787 1404522 ~ 1404801 (+)
G464868 NA non-coding upstream 20373 1401977 ~ 1402215 (+)
G464863 NA non-coding upstream 22518 1399708 ~ 1400070 (+)
G464903 NA non-coding downstream 2580 1426055 ~ 1427835 (+)
G464907 NA non-coding downstream 8163 1431638 ~ 1432014 (+)
G464913 NA non-coding downstream 37664 1461139 ~ 1462477 (+)
G464914 NA non-coding downstream 39671 1463146 ~ 1463509 (+)
G464945 NA non-coding downstream 74176 1497651 ~ 1497875 (+)
G464705 NA other upstream 193489 1228705 ~ 1229099 (+)
LOC110525138 rufy3 other upstream 963582 442716 ~ 549899 (+)
G463813 NA other upstream 1154437 265409 ~ 268151 (+)
LOC118964799 isca1 other upstream 1370098 43896 ~ 52580 (+)
G465203 NA other downstream 638853 2062328 ~ 2064067 (+)
G465355 NA other downstream 981644 2405119 ~ 2406090 (+)
LOC110525071 LOC106585963 other downstream 1381908 2743964 ~ 2866482 (+)
G465578 NA other downstream 1555367 2978842 ~ 2982425 (+)

Expression


Co-expression Network