G464945


Basic Information

Item Value
gene id G464945
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 1497651 ~ 1497875 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU527952
GTCGCGAGAAGTTGATGCAATATTGAGAACCTACAAGGTTACTGTCCCACGTGTACTCTCACCCTCCAACGTCACCGTGGACAGTTTGGCCCAAACTCAGCATTCCAGGCCGTAGGGGGGTGATGGCATGCCCGACCCAGCCCAGTCCTGGCGggcactcctctcctctacccactcGCTGACCAGATGAACCCTGGCACTGTATAACGAAGATCTATCTCGCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU527952 True 225 lncRNA 0.56 1 1497651 1497875

Neighbor

gene id symbol gene type direction distance location
slc4a4a LOC101484802 coding upstream 379062 775664 ~ 1118589 (+)
LOC118964805 NA coding upstream 495363 997029 ~ 1002288 (+)
tars1 LOC106585996 coding upstream 895132 564277 ~ 602519 (+)
LOC118964804 NA coding upstream 941758 555164 ~ 555893 (+)
LOC110525134 NA coding upstream 943397 551781 ~ 554254 (+)
LOC110525062 LOC106570947 coding downstream 504213 2002088 ~ 2105141 (+)
LOC110525063 LOC106570939 coding downstream 651365 2149240 ~ 2199894 (+)
zfr zfr coding downstream 860747 2342330 ~ 2451362 (+)
mtmr12 mtmr12 coding downstream 912356 2410231 ~ 2446470 (+)
LOC110525158 LOC106570936 coding downstream 968599 2466474 ~ 2489239 (+)
G464914 NA non-coding upstream 34142 1463146 ~ 1463509 (+)
G464913 NA non-coding upstream 35174 1461139 ~ 1462477 (+)
G464907 NA non-coding upstream 65637 1431638 ~ 1432014 (+)
G464901 NA non-coding upstream 67099 1422407 ~ 1430552 (+)
G464965 NA non-coding downstream 53131 1551006 ~ 1551223 (+)
G464967 NA non-coding downstream 56182 1554057 ~ 1555803 (+)
G464969 NA non-coding downstream 59860 1557735 ~ 1653335 (+)
G464979 NA non-coding downstream 102624 1600499 ~ 1602013 (+)
G464989 NA non-coding downstream 123537 1621412 ~ 1622041 (+)
G464705 NA other upstream 268552 1228705 ~ 1229099 (+)
LOC110525138 rufy3 other upstream 1038645 442716 ~ 549899 (+)
G463813 NA other upstream 1229500 265409 ~ 268151 (+)
LOC118964799 isca1 other upstream 1445161 43896 ~ 52580 (+)
G465203 NA other downstream 564453 2062328 ~ 2064067 (+)
G465355 NA other downstream 907244 2405119 ~ 2406090 (+)
LOC110525071 LOC106585963 other downstream 1307508 2743964 ~ 2866482 (+)
G465578 NA other downstream 1480967 2978842 ~ 2982425 (+)

Expression


Co-expression Network