G465315


Basic Information

Item Value
gene id G465315
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 2316947 ~ 2317319 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU528443
agcccttcttacatcagctgatatctcaaagtgctgtacagaaacccagcctaaaaccccaaacagcaagcaatgcaggtgtagaagcacagtggctaggaaaaactccctagaaaggccagaacctaggaagaaacctagagaggaaccaggctctgaggggtggccagtcctcttctggctgtgccgggtggagattataacagaacatggccaagatgttcaaacgttcatagatgaccaggtgggtcaaataataataatcacagtagttgtcgagggtgcaacaggtcagcacctcaggagtaaatgtcagttggcttttcatagccgatcattaagagtatctctaccgctcctgctgtctctagag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU528443 True 373 lncRNA 0.48 1 2316947 2317319

Neighbor

gene id symbol gene type direction distance location
LOC110525063 LOC106570939 coding upstream 117053 2149240 ~ 2199894 (+)
LOC110525062 LOC106570947 coding upstream 211806 2002088 ~ 2105141 (+)
slc4a4a LOC101484802 coding upstream 1198358 775664 ~ 1118589 (+)
LOC118964805 NA coding upstream 1314659 997029 ~ 1002288 (+)
tars1 LOC106585996 coding upstream 1714428 564277 ~ 602519 (+)
zfr zfr coding downstream 41303 2342330 ~ 2451362 (+)
mtmr12 mtmr12 coding downstream 92912 2410231 ~ 2446470 (+)
LOC110525158 LOC106570936 coding downstream 149155 2466474 ~ 2489239 (+)
pdzd2 pdzd2 coding downstream 235892 2553211 ~ 2714300 (+)
LOC110516346 NA coding downstream 406446 2723765 ~ 2724931 (+)
G465314 NA non-coding upstream 14684 2301980 ~ 2302263 (+)
G465311 NA non-coding upstream 17017 2297098 ~ 2299930 (+)
G465306 NA non-coding upstream 29857 2286837 ~ 2287090 (+)
G465301 NA non-coding upstream 41867 2274873 ~ 2275080 (+)
G465293 NA non-coding upstream 71046 2245269 ~ 2245901 (+)
G465316 NA non-coding downstream 36 2317355 ~ 2317729 (+)
G465318 NA non-coding downstream 5119 2322438 ~ 2322681 (+)
G465353 NA non-coding downstream 77163 2394482 ~ 2475063 (+)
G465354 NA non-coding downstream 84185 2401504 ~ 2403046 (+)
G465203 NA other upstream 252880 2062328 ~ 2064067 (+)
G464705 NA other upstream 1087848 1228705 ~ 1229099 (+)
LOC110525138 rufy3 other upstream 1857941 442716 ~ 549899 (+)
G463813 NA other upstream 2048796 265409 ~ 268151 (+)
LOC118964799 isca1 other upstream 2264457 43896 ~ 52580 (+)
G465355 NA other downstream 87800 2405119 ~ 2406090 (+)
LOC110525071 LOC106585963 other downstream 488064 2743964 ~ 2866482 (+)
G465578 NA other downstream 661523 2978842 ~ 2982425 (+)
G466813 NA other downstream 1455545 3772864 ~ 3773340 (+)

Expression


Co-expression Network