G505795


Basic Information

Item Value
gene id G505795
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 39667254 ~ 39667805 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU574233
GGTACACATCACAATGATAGAATACATCACTACCCTAGAATCTTGGGGCTGTTGAGAAACTAGTATCCTTACCAATTATGTTAGTGCTCACTTGTTTCGTATTTTCTTGGGAAACAGTATTAACAAAGAGCAATAGCCCTAACTAGGCGATGTTCTAGCCTGTACATTGTTATTACGCTAATTACATACGTTATTCCTGTAGAAATTACCTCGGTATAATGCCCATGTATGTAATGTTGCAGAATATTCCTCTGGAGCATCAGTGTTCCCAGAGTGGGGAatgtcagggagagggggagcgttTCATTatgctacatacTGGATCTACTGTTTATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU574233 True 336 lncRNA 0.40 2 39667254 39667805

Neighbor

gene id symbol gene type direction distance location
pgm5 LOC106585157 coding upstream 83827 39536644 ~ 39583427 (+)
foxd5 LOC106584956 coding upstream 131465 39533936 ~ 39535789 (+)
cbwd cbwd1 coding upstream 140608 39521723 ~ 39526646 (+)
LOC110525923 NA coding upstream 261993 39402537 ~ 39405261 (+)
fancc fancc coding upstream 355156 39269915 ~ 39312098 (+)
LOC110525927 smim15 coding downstream 6159 39673964 ~ 39680031 (+)
LOC110525928 LOC106585161 coding downstream 66898 39734703 ~ 39750180 (+)
LOC110525933 LOC106585165 coding downstream 214972 39882777 ~ 39901525 (+)
LOC110525934 LOC106580580 coding downstream 248333 39916138 ~ 39921723 (+)
LOC110525942 LOC106585173 coding downstream 479531 40147336 ~ 40154986 (+)
G505697 NA non-coding upstream 79484 39582011 ~ 39587770 (+)
G505333 NA non-coding upstream 136063 39435988 ~ 39531191 (+)
G505377 LOC106605384 non-coding upstream 182585 39464768 ~ 39484669 (+)
G505363 NA non-coding upstream 234353 39432680 ~ 39432901 (+)
G505359 NA non-coding upstream 237222 39429805 ~ 39430032 (+)
G505803 NA non-coding downstream 3348 39671153 ~ 39671452 (+)
G505827 NA non-coding downstream 48586 39716391 ~ 39717493 (+)
G505857 NA non-coding downstream 97163 39764968 ~ 39765533 (+)
G505865 LOC106585162 non-coding downstream 105008 39772813 ~ 39776463 (+)
G505882 NA non-coding downstream 122361 39790166 ~ 39864875 (+)
G499111 NA other upstream 5515517 34151140 ~ 34151737 (+)
LOC110525816 LOC106585060 other upstream 6202199 33447246 ~ 33465055 (+)
c6h22orf39 cssa24h22orf39 other upstream 6346906 33317578 ~ 33320353 (+)
LOC110525799 LOC106585046 other upstream 6502993 33135282 ~ 33165186 (+)
G505988 NA other downstream 294847 39962652 ~ 39963098 (+)
G506095 atp5a1 other downstream 528995 40196800 ~ 40203886 (+)
LOC110525949 LOC106585178 other downstream 589262 40256994 ~ 40259050 (+)

Expression


Co-expression Network